Lineage for Family c.1.1.1: Triosephosphate isomerase (TIM)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2434695Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2434696Superfamily c.1.1: Triosephosphate isomerase (TIM) [51351] (2 families) (S)
  5. 2434697Family c.1.1.1: Triosephosphate isomerase (TIM) [51352] (2 proteins)
    automatically mapped to Pfam PF00121

Proteins:

  1. 2434698Triosephosphate isomerase [51353] (21 species)
    1. 2434699Species Bacillus stearothermophilus [TaxId:1422] [51363] (2 PDB entries)
    2. 2434704Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51356] (8 PDB entries)
    3. 2434721Species Chicken (Gallus gallus) [TaxId:9031] [51354] (17 PDB entries)
      Uniprot P00940
    4. 2434756Species Entamoeba (Entamoeba histolytica) [TaxId:5759] [82236] (1 PDB entry)
    5. 2434759Species Escherichia coli [TaxId:562] [51361] (1 PDB entry)
    6. 2434762Species Human (Homo sapiens) [TaxId:9606] [51355] (14 PDB entries)
    7. 2434801Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [51359] (31 PDB entries)
      Uniprot Q07412
    8. 2434873Species Methanocaldococcus jannaschii [TaxId:243232] [187790] (1 PDB entry)
    9. 2434882Species Nematode (Caenorhabditis elegans) [TaxId:6239] [82235] (1 PDB entry)
    10. 2434885Species Pyrococcus woesei [TaxId:2262] [63891] (1 PDB entry)
    11. 2434894Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [102035] (4 PDB entries)
    12. 2434907Species Schistosoma mansoni [TaxId:6183] [378818] (1 PDB entry)
    13. 2434916Species Staphylococcus aureus [TaxId:282458] [189897] (6 PDB entries)
    14. 2434929Species Synthetic, hybrid between Escherichia coli and chicken TIM [51362] (1 PDB entry)
    15. 2434934Species Thermoproteus tenax [TaxId:2271] [110342] (1 PDB entry)
      Uniprot Q8NKN9
    16. 2434943Species Thermotoga maritima [TaxId:2336] [51365] (1 PDB entry)
    17. 2434946Species Trypanosoma cruzi [TaxId:5693] [51358] (5 PDB entries)
      Uniprot P52270
    18. 2434956Species Trypanosome (Leishmania mexicana) [TaxId:5665] [51360] (8 PDB entries)
    19. 2434965Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [51357] (41 PDB entries)
    20. 2435056Species Vibrio marinus [TaxId:90736] [51364] (2 PDB entries)
    21. 2435073Species Yellow mealworm (Tenebrio molitor) [TaxId:7067] [187848] (1 PDB entry)
  2. 2435078automated matches [196175] (9 species)
    not a true protein
    1. 2435079Species Gemmata obscuriglobus [TaxId:114] [275087] (1 PDB entry)
    2. 2435082Species Human (Homo sapiens) [TaxId:9606] [268561] (3 PDB entries)
    3. 2435089Species Leishmania sp. [TaxId:438838] [319546] (1 PDB entry)
    4. 2435092Species Opisthorchis viverrini [TaxId:6198] [359399] (4 PDB entries)
    5. 2435107Species Pacific white shrimp (Litopenaeus vannamei) [TaxId:6689] [323300] (1 PDB entry)
    6. 2435110Species Rhipicephalus microplus [TaxId:6941] [196184] (1 PDB entry)
    7. 2435113Species Scylla paramamosain [TaxId:85552] [377658] (1 PDB entry)
    8. 2435116Species Trypanosoma brucei [TaxId:5702] [271658] (9 PDB entries)
    9. 2435143Species Trypanosoma cruzi [TaxId:5693] [196176] (1 PDB entry)

More info for Family c.1.1.1: Triosephosphate isomerase (TIM)

Timeline for Family c.1.1.1: Triosephosphate isomerase (TIM):