Lineage for Family c.1.1.1: Triosephosphate isomerase (TIM)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2826026Superfamily c.1.1: Triosephosphate isomerase (TIM) [51351] (2 families) (S)
  5. 2826027Family c.1.1.1: Triosephosphate isomerase (TIM) [51352] (2 proteins)
    automatically mapped to Pfam PF00121

Proteins:

  1. 2826028Triosephosphate isomerase [51353] (21 species)
    1. 2826029Species Bacillus stearothermophilus [TaxId:1422] [51363] (2 PDB entries)
    2. 2826034Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [51356] (8 PDB entries)
    3. 2826051Species Blood fluke (Schistosoma mansoni) [TaxId:6183] [378818] (1 PDB entry)
    4. 2826060Species Chicken (Gallus gallus) [TaxId:9031] [51354] (17 PDB entries)
      Uniprot P00940
    5. 2826095Species Entamoeba (Entamoeba histolytica) [TaxId:5759] [82236] (1 PDB entry)
    6. 2826098Species Escherichia coli [TaxId:562] [51361] (1 PDB entry)
    7. 2826101Species Human (Homo sapiens) [TaxId:9606] [51355] (15 PDB entries)
    8. 2826142Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [51359] (31 PDB entries)
      Uniprot Q07412
    9. 2826214Species Methanocaldococcus jannaschii [TaxId:243232] [187790] (1 PDB entry)
    10. 2826223Species Nematode (Caenorhabditis elegans) [TaxId:6239] [82235] (1 PDB entry)
    11. 2826226Species Pyrococcus woesei [TaxId:2262] [63891] (1 PDB entry)
    12. 2826235Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [102035] (4 PDB entries)
    13. 2826248Species Staphylococcus aureus [TaxId:282458] [189897] (6 PDB entries)
    14. 2826261Species Synthetic, hybrid between Escherichia coli and chicken TIM [51362] (1 PDB entry)
    15. 2826266Species Thermoproteus tenax [TaxId:2271] [110342] (1 PDB entry)
      Uniprot Q8NKN9
    16. 2826275Species Thermotoga maritima [TaxId:2336] [51365] (1 PDB entry)
    17. 2826278Species Trypanosoma cruzi [TaxId:5693] [51358] (5 PDB entries)
      Uniprot P52270
    18. 2826288Species Trypanosome (Leishmania mexicana) [TaxId:5665] [51360] (13 PDB entries)
    19. 2826302Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [51357] (41 PDB entries)
    20. 2826393Species Vibrio marinus [TaxId:90736] [51364] (2 PDB entries)
    21. 2826410Species Yellow mealworm (Tenebrio molitor) [TaxId:7067] [187848] (1 PDB entry)
  2. 2826415automated matches [196175] (9 species)
    not a true protein
    1. 2826416Species Gemmata obscuriglobus [TaxId:114] [275087] (1 PDB entry)
    2. 2826419Species Human (Homo sapiens) [TaxId:9606] [268561] (2 PDB entries)
    3. 2826424Species Leishmania sp. [TaxId:438838] [319546] (1 PDB entry)
    4. 2826427Species Opisthorchis viverrini [TaxId:6198] [359399] (4 PDB entries)
    5. 2826442Species Pacific white shrimp (Litopenaeus vannamei) [TaxId:6689] [323300] (1 PDB entry)
    6. 2826445Species Rhipicephalus microplus [TaxId:6941] [196184] (1 PDB entry)
    7. 2826448Species Scylla paramamosain [TaxId:85552] [377658] (1 PDB entry)
    8. 2826451Species Trypanosoma brucei [TaxId:5702] [271658] (9 PDB entries)
    9. 2826478Species Trypanosoma cruzi [TaxId:5693] [196176] (1 PDB entry)

More info for Family c.1.1.1: Triosephosphate isomerase (TIM)

Timeline for Family c.1.1.1: Triosephosphate isomerase (TIM):