Lineage for Protein: Type III antifreeze protein, AFP III

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 471373Fold b.85: beta-clip [51268] (7 superfamilies)
    double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
  4. 471374Superfamily b.85.1: AFP III-like domain (Pfam 01354) [51269] (1 family) (S)
    duplication: consists of two structural repeats related by pseudo dyad
  5. 471375Family b.85.1.1: AFP III-like domain (Pfam 01354) [51270] (2 proteins)
  6. 471379Protein Type III antifreeze protein, AFP III [51271] (3 species)

Species:

  1. 471380Antarctic eel pout (Austrolycichthys brachycephalus) and (Lycodichthys dearborni), RD3 isoform [TaxId:36221] [51273] (4 PDB entries)
    duplication: intramolecular dimer
    1. Domains for 1c89:
      1. 471385Domain d1c89a1: 1c89 A:1-68 [28314]
      2. 471386Domain d1c89a2: 1c89 A:69-134 [28315]
    2. Domains for 1c8a:
      1. 471381Domain d1c8aa1: 1c8a A:1-68 [28312]
      2. 471382Domain d1c8aa2: 1c8a A:69-134 [28313]
    3. Domain for 3nla:
    4. Domain for 3rdn:
  2. 471387Antarctic eel pout (Lycodichthys dearborni), RD1 isoform [TaxId:8201] [89424] (1 PDB entry)
  3. 471389Ocean pout (Macrozoarces americanus), different isoforms [TaxId:8199] [51272] (31 PDB entries)
    1. Domain for 1ame:
    2. Domain for 1b7i:
    3. Domain for 1b7j:
    4. Domain for 1b7k:
    5. Domain for 1ekl:
    6. Domain for 1gzi:
    7. Domain for 1hg7:
    8. Domain for 1jab:
    9. Domain for 1kde:
    10. Domain for 1kdf:
    11. Domain for 1msi:
    12. Domain for 1msj:
    13. Domain for 1ops:
    14. Domain for 2ame:
    15. Domain for 2jia:
    16. Domain for 2msi:
    17. Domain for 2msj:
    18. Domain for 2spg:
    19. Domain for 3ame:
    20. Domain for 3msi:
    21. Domain for 4ame:
    22. Domain for 4msi:
    23. Domain for 5msi:
    24. Domain for 6ame:
    25. Domain for 6msi:
    26. Domain for 7ame:
    27. Domain for 7msi:
    28. Domain for 8ame:
    29. Domain for 8msi:
    30. Domain for 9ame:
    31. Domain for 9msi:

More info for Protein Type III antifreeze protein, AFP III from b.85.1.1: AFP III-like domain (Pfam 01354)

Timeline for Protein Type III antifreeze protein, AFP III from b.85.1.1: AFP III-like domain (Pfam 01354):