Class b: All beta proteins [48724] (180 folds) |
Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies) one turn of helix is made by two pairs of antiparallel strands linked with short turns has appearance of a sandwich of distinct architecture and jelly-roll topology |
Superfamily b.82.1: RmlC-like cupins [51182] (25 families) |
Family b.82.1.2: Germin/Seed storage 7S protein [51187] (5 proteins) has additional insertions and/or extensions that are not grouped together |
Protein Seed storage 7S protein [51188] (6 species) duplication: consists of two germin-like domains spatially arranged as subunits in the RmlC dimer; trimer is similar to the germin hexamer |
French bean (Phaseolus vulgaris), phaseolin [TaxId:3885] [51189] (2 PDB entries) |
Domain d1phsa1: 1phs A:11-212 [28088] CA-atoms only |
Domain d1phsa2: 1phs A:220-381 [28089] CA-atoms only |
Domain d2phla1: 2phl A:11-210 [28082] complexed with nag, po4 |
Domain d2phla2: 2phl A:220-381 [28083] complexed with nag, po4 |
Domain d2phlb1: 2phl B:11-210 [28084] complexed with nag, po4 |
Domain d2phlb2: 2phl B:220-381 [28085] complexed with nag, po4 |
Domain d2phlc1: 2phl C:10-210 [28086] complexed with nag, po4 |
Domain d2phlc2: 2phl C:220-381 [28087] complexed with nag, po4 |
Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId:3823] [51190] (11 PDB entries) |
Domain d1caua_: 1cau A: [28102] |
Domain d1caub_: 1cau B: [28103] |
Domain d1cava_: 1cav A: [28110] |
Domain d1cavb_: 1cav B: [28111] |
Domain d1cawa_: 1caw A: [28112] |
Domain d1cawb_: 1caw B: [28113] |
Domain d1caxa_: 1cax A: [28104] |
Domain d1caxb_: 1cax B: [28105] |
Domain d1caxc_: 1cax C: [28106] |
Domain d1caxd_: 1cax D: [28107] |
Domain d1caxe_: 1cax E: [28108] |
Domain d1caxf_: 1cax F: [28109] |
Domain d1dgr.1: 1dgr X:,Y: [28097] complexed with po4 |
Domain d1dgr.2: 1dgr V:,W: [28099] complexed with po4 |
Domain d1dgr.4: 1dgr N:,M: [144355] complexed with po4 |
Domain d1dgra_: 1dgr A: [28096] complexed with po4 |
Domain d1dgrb_: 1dgr B: [28098] complexed with po4 |
Domain d1dgrc_: 1dgr C: [28100] complexed with po4 |
Domain d1dgw.1: 1dgw X:,Y: [28091] complexed with po4 |
Domain d1dgwa_: 1dgw A: [28090] complexed with po4 |
Domain d2caua1: 2cau A:46-223 [28092] |
Domain d2caua2: 2cau A:246-421 [28093] |
Domain d2cava1: 2cav A:46-225 [28094] |
Domain d2cava2: 2cav A:246-422 [28095] |
Domain d6v7ga1: 6v7g A:46-225 [381197] automated match to d2cava1 complexed with act, bez, cit |
Domain d6v7ga2: 6v7g A:241-424 [381198] automated match to d2cava2 complexed with act, bez, cit |
Domain d6v7ja1: 6v7j A:46-223 [381205] automated match to d2cava1 complexed with bez, ca, gol |
Domain d6v7ja2: 6v7j A:245-424 [381206] automated match to d2cava2 complexed with bez, ca, gol |
Domain d6v7jb1: 6v7j B:46-225 [381251] automated match to d2cava1 complexed with bez, ca, gol |
Domain d6v7jb2: 6v7j B:246-424 [381252] automated match to d2cava2 complexed with bez, ca, gol |
Domain d6v7jc1: 6v7j C:46-227 [381262] automated match to d2cava1 complexed with bez, ca, gol |
Domain d6v7jc2: 6v7j C:246-424 [381263] automated match to d2cava2 complexed with bez, ca, gol |
Domain d6v7la1: 6v7l A:46-223 [381193] automated match to d2cava1 complexed with bez |
Domain d6v7la2: 6v7l A:246-424 [381194] automated match to d2cava2 complexed with bez |
Domain d6v7lb1: 6v7l B:46-226 [381191] automated match to d2cava1 complexed with bez |
Domain d6v7lb2: 6v7l B:246-424 [381192] automated match to d2cava2 complexed with bez |
Domain d6v7lc1: 6v7l C:46-225 [381199] automated match to d2cava1 complexed with bez |
Domain d6v7lc2: 6v7l C:246-424 [381200] automated match to d2cava2 complexed with bez |
Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId:3847] [110313] (1 PDB entry) Uniprot Q7XXT2 204-621 |
Domain d1uika1: 1uik A:148-350 [107878] complexed with mg |
Domain d1uika2: 1uik A:351-535 [107879] complexed with mg |
Domain d1uikb1: 1uik B:148-350 [107880] complexed with mg |
Domain d1uikb2: 1uik B:351-535 [107881] complexed with mg |
Domain d1uikc1: 1uik C:148-350 [107882] complexed with mg |
Domain d1uikc2: 1uik C:351-535 [107883] complexed with mg |
Soybean (Glycine max), beta-conglycinin beta subunit [TaxId:3847] [109608] (3 PDB entries) Uniprot P25974 |
Domain d1ipja1: 1ipj A:9-176 [71258] complexed with nag |
Domain d1ipja2: 1ipj A:183-393 [71259] complexed with nag |
Domain d1ipjb1: 1ipj B:9-175 [71260] complexed with nag |
Domain d1ipjb2: 1ipj B:186-393 [71261] complexed with nag |
Domain d1ipjc1: 1ipj C:9-177 [71262] complexed with nag |
Domain d1ipjc2: 1ipj C:181-393 [71263] complexed with nag |
Domain d1ipka1: 1ipk A:8-174 [71264] |
Domain d1ipka2: 1ipk A:183-392 [71265] |
Domain d1ipkb1: 1ipk B:9-174 [71266] |
Domain d1ipkb2: 1ipk B:183-392 [71267] |
Domain d1ipkc1: 1ipk C:3-180 [71268] |
Domain d1ipkc2: 1ipk C:181-392 [71269] |
Domain d1uija1: 1uij A:6-175 [107866] |
Domain d1uija2: 1uij A:183-392 [107867] |
Domain d1uijb1: 1uij B:6-175 [107868] |
Domain d1uijb2: 1uij B:183-392 [107869] |
Domain d1uijc1: 1uij C:6-175 [107870] |
Domain d1uijc2: 1uij C:183-392 [107871] |
Domain d1uijd1: 1uij D:6-175 [107872] |
Domain d1uijd2: 1uij D:183-392 [107873] |
Domain d1uije1: 1uij E:6-175 [107874] |
Domain d1uije2: 1uij E:183-392 [107875] |
Domain d1uijf1: 1uij F:6-175 [107876] |
Domain d1uijf2: 1uij F:183-392 [107877] |
Soybean (Glycine max), glycinin A3B4 [TaxId:3847] [89412] (1 PDB entry) |
Domain d1od5a1: 1od5 A:7-251 [86832] complexed with co3, mg |
Domain d1od5a2: 1od5 A:321-493 [86833] complexed with co3, mg |
Domain d1od5b1: 1od5 B:7-251 [86834] complexed with co3, mg |
Domain d1od5b2: 1od5 B:321-493 [86835] complexed with co3, mg |
Soybean (Glycine max), proglycinin [TaxId:3847] [69345] (3 PDB entries) |
Domain d1fxza1: 1fxz A:10-248 [65059] |
Domain d1fxza2: 1fxz A:297-470 [65060] |
Domain d1fxzb1: 1fxz B:10-248 [65061] |
Domain d1fxzb2: 1fxz B:297-470 [65062] |
Domain d1fxzc1: 1fxz C:10-248 [65063] |
Domain d1fxzc2: 1fxz C:297-470 [65064] |
Domain d1ucxa1: 1ucx A:14-248 [99192] mutant |
Domain d1ucxa2: 1ucx A:297-470 [99193] mutant |
Domain d1ucxb1: 1ucx B:14-248 [99194] mutant |
Domain d1ucxb2: 1ucx B:297-470 [99195] mutant |
Domain d1ucxc1: 1ucx C:14-248 [99196] mutant |
Domain d1ucxc2: 1ucx C:297-470 [99197] mutant |
Domain d1ud1a1: 1ud1 A:10-248 [99202] mutant |
Domain d1ud1a2: 1ud1 A:297-470 [99203] mutant |
Domain d1ud1b1: 1ud1 B:10-248 [99204] mutant |
Domain d1ud1b2: 1ud1 B:297-470 [99205] mutant |
Domain d1ud1c1: 1ud1 C:10-248 [99206] mutant |
Domain d1ud1c2: 1ud1 C:297-470 [99207] mutant |
Timeline for Protein Seed storage 7S protein from b.82.1.2: Germin/Seed storage 7S protein: