Lineage for Family b.82.1.2: Germin/Seed storage 7S protein

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2070014Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2070015Superfamily b.82.1: RmlC-like cupins [51182] (25 families) (S)
  5. 2070093Family b.82.1.2: Germin/Seed storage 7S protein [51187] (5 protein domains)

Protein Domains:

  1. 2070094Auxin binding protein [75030] (1 species)
  2. 2070104Germin [63853] (1 species)
    Metal (manganese)-binding protein with oxalate oxidase and superoxide dismutase activities; homohexamer
  3. 2070111Oxalate decarboxylase OxdC (YvrK) [75033] (1 species)
    duplication: consists of two germin-like metal-ion binding domains
  4. 2070117Seed storage 7S protein [51188] (6 species)
    duplication: consists of two germin-like domains spatially arranged as subunits in the RmlC dimer; trimer is similar to the germin hexamer
    1. 2070118Species French bean (Phaseolus vulgaris), phaseolin [TaxId:3885] [51189] (2 PDB entries)
    2. 2070127Species Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId:3823] [51190] (8 PDB entries)
    3. 2070152Species Soybean (Glycine max), beta-conglycinin alpha prime subunit [TaxId:3847] [110313] (1 PDB entry)
      Uniprot Q7XXT2 204-621
    4. 2070159Species Soybean (Glycine max), beta-conglycinin beta subunit [TaxId:3847] [109608] (3 PDB entries)
      Uniprot P25974
    5. 2070184Species Soybean (Glycine max), glycinin A3B4 [TaxId:3847] [89412] (1 PDB entry)
    6. 2070189Species Soybean (Glycine max), proglycinin [TaxId:3847] [69345] (3 PDB entries)
  5. 2070208automated matches [190784] (2 species)
    not a true protein
    1. 2070209Species Bacillus subtilis [TaxId:1423] [188035] (6 PDB entries)
    2. 2070215Species Bacillus subtilis [TaxId:224308] [237304] (2 PDB entries)

More info for Family b.82.1.2: Germin/Seed storage 7S protein

Timeline for Family b.82.1.2: Germin/Seed storage 7S protein: