Lineage for Superfamily b.82.1: RmlC-like cupins

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 470565Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 470566Superfamily b.82.1: RmlC-like cupins [51182] (13 families) (S)

Families:

  1. 470567b.82.1.1: dTDP-sugar isomerase [51183] (2 proteins)
  2. 470598b.82.1.2: Germin/Seed storage 7S protein [51187] (4 proteins)
  3. 470708b.82.1.3: Type I phosphomannose isomerase [51191] (2 proteins)
    Share a common two-domain fold with the 7S protein; there is a metal-binding site in the N-terminal domain similar to the metal-binding site of germin
  4. 470716b.82.1.4: Homogentisate dioxygenase [51194] (1 protein)
    Share a common two-domain fold with the 7S protein; there is a metal-binding site in the C-terminal domain similar to the metal-binding site of germin
  5. 470721b.82.1.5: Quercetin 2,3-dioxygenase [75035] (1 protein)
    Share a common two-domain fold with the 7S protein; there is a metal-binding site in the N-terminal domain similar to the metal-binding site of germin
  6. 470744b.82.1.6: Acireductone dioxygenase [82191] (1 protein)
  7. 470748b.82.1.7: Glucose-6-phosphate isomerase, GPI [89403] (1 protein)
  8. 470765b.82.1.8: Hypothetical protein TM1112 [89406] (1 protein)
  9. 470771b.82.1.9: Hypothetical protein TM1287 [89409] (1 protein)
  10. 470776b.82.1.10: Hypothetical protein TM1459 [101976] (1 protein)
  11. 470781b.82.1.11: YlbA-like [101979] (4 proteins)
    Pfam 05899; formerly pfam06038
    duplication: consists of two germin-like domains
  12. 470797b.82.1.12: Pirin [101984] (1 protein)
    Share a common two-domain fold with the 7S protein; there is a metal-binding site in the N-terminal domain similar to the metal-binding site of germin
  13. 470801b.82.1.13: KduI-like (Pfam 04962) [110318] (1 protein)
    duplication: consists of two germin-like domains

More info for Superfamily b.82.1: RmlC-like cupins

Timeline for Superfamily b.82.1: RmlC-like cupins: