SCOP 1.69: Family b.80.1.3: Galacturonase

Lineage for Family b.80.1.3: Galacturonase

1. Root: SCOP 1.69

2. Class b: All beta proteins [48724] (144 folds)

3. Fold b.80: Single-stranded right-handed beta-helix [51125] (7 superfamilies)
   superhelix turns are made of parallel beta-strands and (short) turns

4. Superfamily b.80.1: Pectin lyase-like [51126] (11 families)
   superhelix turns are made of 3 strands each

5. Family b.80.1.3: Galacturonase [51137] (2 proteins)
   this is a repeat family; one repeat unit is 1bhe A:244-269 found in domain

Proteins:

1. Polygalacturonase [51140] (6 species)

   1. Species Erwinia carotovora, subsp. carotovora [TaxId:554] [51141] (1 PDB entry)

   2. Species Fungus (Aspergillus aculeatus) [TaxId:5053] [63847] (2 PDB entries)

   3. Species Fungus (Aspergillus niger), endo-polygalacturonase I [TaxId:5061] [101950] (1 PDB entry)

   4. Species Fungus (Aspergillus niger), endo-polygalacturonase II [TaxId:5061] [63382] (1 PDB entry)

   5. Species Fungus (Stereum purpureum), endo-polygalacturonase I [TaxId:58369] [75025] (3 PDB entries)

   6. Species Fusarium moniliforme [TaxId:117187] [69332] (1 PDB entry)

2. Rhamnogalacturonase A [51138] (1 species)

   • Species Aspergillus aculeatus [TaxId:5053] [51139] (1 PDB entry)

More info for Family b.80.1.3: Galacturonase

Timeline for Family b.80.1.3: Galacturonase:

• Family b.80.1.3: Galacturonase first appeared (with stable ids) in SCOP 1.55
  
• Family b.80.1.3: Galacturonase appears in SCOP 1.67
  
• Family b.80.1.3: Galacturonase appears in SCOP 1.71
  
• Family b.80.1.3: Galacturonase appears in the current release, SCOPe 2.08