SCOPe 2.06: Family b.80.1.1: Pectate lyase-like

Lineage for Family b.80.1.1: Pectate lyase-like

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
   superhelix turns are made of parallel beta-strands and (short) turns

4. Superfamily b.80.1: Pectin lyase-like [51126] (12 families)
   superhelix turns are made of 3 strands each

5. Family b.80.1.1: Pectate lyase-like [51127] (3 proteins)
   this is a repeat family; one repeat unit is 1pxz A:227-250 found in domain

Proteins:

1. Major pollen allergen Jun a 1 [117306] (1 species)

   • Species Ozark white cedar (Juniperus ashei) [TaxId:13101] [117307] (1 PDB entry)
     Uniprot P81294 22-367

2. Pectate lyase [51128] (5 species)

   1. Species Bacillus sp., strain ksmp15 [TaxId:1409] [51132] (1 PDB entry)
      Low-molecular weight high-alkaline enzyme

   2. Species Bacillus subtilis [TaxId:1423] [51131] (2 PDB entries)

   3. Species Erwinia chrysanthemi, type A [TaxId:556] [75024] (4 PDB entries)

   4. Species Erwinia chrysanthemi, type C [TaxId:556] [51129] (14 PDB entries)

   5. Species Erwinia chrysanthemi, type E [TaxId:556] [51130] (1 PDB entry)

3. automated matches [190887] (1 species)
   not a true protein

   • Species Bacillus subtilis [TaxId:1423] [188279] (8 PDB entries)

More info for Family b.80.1.1: Pectate lyase-like

Timeline for Family b.80.1.1: Pectate lyase-like:

• Family b.80.1.1: Pectate lyase-like first appeared (with stable ids) in SCOP 1.55, called Family b.80.1.1: Pectate lyase
  
• Family b.80.1.1: Pectate lyase-like appears in SCOPe 2.05
  
• Family b.80.1.1: Pectate lyase-like appears in SCOPe 2.07
  
• Family b.80.1.1: Pectate lyase-like appears in the current release, SCOPe 2.08