Lineage for Superfamily b.80.1: Pectin lyase-like

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2422942Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 2422943Superfamily b.80.1: Pectin lyase-like [51126] (12 families) (S)
    superhelix turns are made of 3 strands each

Families:

  1. 2422944b.80.1.1: Pectate lyase-like [51127] (3 proteins)
    this is a repeat family; one repeat unit is 1pxz A:227-250 found in domain
  2. 2422992b.80.1.2: Pectin lyase [51133] (1 protein)
    this is a repeat family; one repeat unit is 1idj A:227-250 found in domain
  3. 2423000b.80.1.3: Galacturonase [51137] (3 proteins)
    this is a repeat family; one repeat unit is 1bhe A:244-269 found in domain
  4. 2423039b.80.1.4: Chondroitinase B [51144] (1 protein)
    this is a repeat family; one repeat unit is 1dbg A:263-289 found in domain
  5. 2423046b.80.1.5: Pectin methylesterase [51147] (2 proteins)
    automatically mapped to Pfam PF01095
    this is a repeat family; one repeat unit is 1qjv A:170-291 found in domain
  6. 2423071b.80.1.6: P22 tailspike protein [51150] (1 protein)
    automatically mapped to Pfam PF09251
  7. 2423092b.80.1.7: Virulence factor P.69 pertactin [51153] (2 proteins)
  8. 2423100b.80.1.8: iota-carrageenase [69333] (1 protein)
    this is a repeat family; one repeat unit is 1h80 A:181-215 found in domain
  9. 2423107b.80.1.9: Pectate transeliminase [101951] (1 protein)
    this is a repeat family; one repeat unit is 1ru4 A:216-242 found in domain
  10. 2423111b.80.1.10: Dextranase, catalytic domain [101954] (1 protein)
    this is a repeat family; one repeat unit is 1ogm X:388-409 found in domain
  11. 2423116b.80.1.11: Filamentous hemagglutinin FhaB, secretion domain [101957] (1 protein)
    this is a repeat family; one repeat unit is 1rwr A:258-278 found in domain
  12. 2423120b.80.1.0: automated matches [191490] (1 protein)
    not a true family

More info for Superfamily b.80.1: Pectin lyase-like

Timeline for Superfamily b.80.1: Pectin lyase-like: