Lineage for Superfamily b.80.1: Pectin lyase-like

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1806195Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 1806196Superfamily b.80.1: Pectin lyase-like [51126] (12 families) (S)
    superhelix turns are made of 3 strands each

Families:

  1. 1806197b.80.1.1: Pectate lyase-like [51127] (3 proteins)
    this is a repeat family; one repeat unit is 1pxz A:227-250 found in domain
  2. 1806243b.80.1.2: Pectin lyase [51133] (1 protein)
    this is a repeat family; one repeat unit is 1idj A:227-250 found in domain
  3. 1806251b.80.1.3: Galacturonase [51137] (3 proteins)
    this is a repeat family; one repeat unit is 1bhe A:244-269 found in domain
  4. 1806287b.80.1.4: Chondroitinase B [51144] (1 protein)
    this is a repeat family; one repeat unit is 1dbg A:263-289 found in domain
  5. 1806294b.80.1.5: Pectin methylesterase [51147] (2 proteins)
    automatically mapped to Pfam PF01095
    this is a repeat family; one repeat unit is 1qjv A:170-291 found in domain
  6. 1806319b.80.1.6: P22 tailspike protein [51150] (1 protein)
    automatically mapped to Pfam PF09251
  7. 1806340b.80.1.7: Virulence factor P.69 pertactin [51153] (2 proteins)
  8. 1806348b.80.1.8: iota-carrageenase [69333] (1 protein)
    this is a repeat family; one repeat unit is 1h80 A:181-215 found in domain
  9. 1806355b.80.1.9: Pectate transeliminase [101951] (1 protein)
    this is a repeat family; one repeat unit is 1ru4 A:216-242 found in domain
  10. 1806359b.80.1.10: Dextranase, catalytic domain [101954] (1 protein)
    this is a repeat family; one repeat unit is 1ogm X:388-409 found in domain
  11. 1806364b.80.1.11: Filamentous hemagglutinin FhaB, secretion domain [101957] (1 protein)
    this is a repeat family; one repeat unit is 1rwr A:258-278 found in domain
  12. 1806368b.80.1.0: automated matches [191490] (1 protein)
    not a true family

More info for Superfamily b.80.1: Pectin lyase-like

Timeline for Superfamily b.80.1: Pectin lyase-like: