Lineage for Family b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1804045Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
    folded sheet; greek-key
  4. 1804046Superfamily b.71.1: Glycosyl hydrolase domain [51011] (6 families) (S)
    this domain is C-terminal to the catalytic beta/alpha barrel domain
  5. 1804047Family b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain [51012] (22 proteins)
    this domain follows the catalytic beta/alpha barrel domain

Proteins:

  1. 18040481,4-alpha-glucan branching enzyme [82179] (1 species)
  2. 18040544-alpha-glucanotransferase [75018] (1 species)
  3. 1804060A4 beta-galactosidase [82181] (1 species)
    the catalytic domain of this protein is similar to that of the bacterial beta-amylase
  4. 1804064Amylosucrase [69328] (1 species)
  5. 1804076Animal alpha-amylase [51024] (3 species)
    1. 1804077Species Human (Homo sapiens) [TaxId:9606] [51026] (49 PDB entries)
      Uniprot P04746 16-511 ! SQ 04746
    2. 1804127Species Pig (Sus scrofa) [TaxId:9823] [51025] (13 PDB entries)
    3. 1804147Species Yellow mealworm (Tenebrio molitor), larva [TaxId:7067] [51027] (4 PDB entries)
  6. 1804152Bacterial alpha-Amylase [51013] (9 species)
    1. Species Bacillus halmapalus [TaxId:79882] [141551] (1 PDB entry)
      Uniprot P19571 432-518
    2. 1804155Species Bacillus licheniformis [TaxId:1402] [51014] (8 PDB entries)
    3. 1804164Species Bacillus sp. 707 [TaxId:1416] [117297] (4 PDB entries)
      Uniprot P19571 38-518
    4. 1804169Species Bacillus sp., ksm-k38 [TaxId:1409] [89382] (6 PDB entries)
    5. 1804176Species Bacillus stearothermophilus [TaxId:1422] [51017] (1 PDB entry)
    6. 1804178Species Bacillus subtilis [TaxId:1423] [51016] (2 PDB entries)
      Uniprot P00691
    7. 1804181Species Halothermothrix orenii [TaxId:31909] [141552] (1 PDB entry)
      Uniprot Q8GPL8 437-515
    8. 1804183Species Pseudoalteromonas haloplanktis [TaxId:228] [51015] (9 PDB entries)
    9. 1804193Species Pyrococcus woesei [TaxId:2262] [89383] (3 PDB entries)
  7. 1804197Cyclodextrin glycosyltransferase [51018] (5 species)
    contains two more all-beta domains in C-terminal region, Immunoglobulin-like and trasthyretin-like
    1. 1804198Species Bacillus circulans, different strains [TaxId:1397] [51019] (36 PDB entries)
    2. 1804239Species Bacillus sp., strain 1011 [TaxId:1409] [51022] (8 PDB entries)
      Uniprot P05618
    3. 1804256Species Bacillus stearothermophilus [TaxId:1422] [51020] (1 PDB entry)
    4. 1804258Species Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId:1422] [51021] (2 PDB entries)
    5. 1804261Species Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId:33950] [51023] (4 PDB entries)
  8. 1804266Cyclomaltodextrinase [101917] (1 species)
    protein shares similar domain organization with maltogenic amylases but differs in the spatial arrangement of its domains
  9. 1804270Fungal alpha-amylase [51028] (2 species)
    1. 1804271Species Aspergillus niger, acid amylase [TaxId:5061] [51029] (1 PDB entry)
    2. 1804273Species Aspergillus oryzae, Taka-amylase [TaxId:5062] [51030] (8 PDB entries)
  10. 1804285G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) [51038] (1 species)
    single beta-sheet; probable result of a decay of the common-fold
  11. 1804296Glycosyltrehalose trehalohydrolase [51034] (2 species)
    1. 1804297Species Deinococcus radiodurans [TaxId:1299] [141553] (9 PDB entries)
      Uniprot Q9RX51 529-600
    2. 1804307Species Sulfolobus solfataricus, km1 [TaxId:2287] [51035] (8 PDB entries)
  12. 1804316Isoamylase [51036] (1 species)
  13. 1804319Isomaltulose synthase PalI [89385] (1 species)
  14. 1804322Maltogenic amylase [51031] (4 species)
    1. 1804323Species Bacillus sp., cyclomaltodextrinase [TaxId:1409] [75016] (1 PDB entry)
    2. 1804326Species Thermoactinomyces vulgaris, TVAI [TaxId:2026] [75017] (8 PDB entries)
    3. Species Thermoactinomyces vulgaris, TVAII [TaxId:2026] [51033] (11 PDB entries)
    4. 1804359Species Thermus sp. [TaxId:275] [51032] (2 PDB entries)
  15. 1804364Maltooligosyl trehalose synthase [82177] (1 species)
  16. 1804367Maltosyltransferase [63835] (1 species)
  17. 1804371Melibiase [75020] (4 species)
    1. 1804372Species Chicken (Gallus gallus) [TaxId:9031] [75021] (2 PDB entries)
      alpha-N-acetylgalactosaminidase
    2. 1804375Species Human (Homo sapiens) [TaxId:9606] [101919] (17 PDB entries)
      alpha-galactosidase A
    3. 1804410Species Rice (Oryza sativa) [TaxId:4530] [89387] (1 PDB entry)
      alpha-galactosidase
    4. 1804412Species Trichoderma reesei [TaxId:51453] [110300] (2 PDB entries)
      Uniprot Q92456; Alpha-galactosidase agl1;
  18. 1804415Neopullulanase [82175] (1 species)
    homologous to Maltogenic amylase
  19. 1804425Oligo-1,6-glucosidase [51042] (1 species)
  20. 1804428Plant alpha-amylase [51040] (2 species)
    single beta-sheet; probable result of a decay of the common-fold
    1. 1804429Species Barley (Hordeum vulgare), AMY1 isozyme [TaxId:4513] [89384] (7 PDB entries)
    2. 1804439Species Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId:4513] [51041] (3 PDB entries)
  21. 1804444Pullulanase PulA [159262] (1 species)
  22. 1804452Sucrose phosphorylase [101920] (1 species)
    single beta-sheet; probable result of a decay of the common-fold

More info for Family b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain

Timeline for Family b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain: