Lineage for Protein: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2066579Fold b.70: 8-bladed beta-propeller [50997] (3 superfamilies)
    consists of eight 4-stranded beta-sheet motifs; meander
    also found in some members of the WD40-repeat superfamily
  4. 2066644Superfamily b.70.2: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase [51004] (1 family) (S)
  5. 2066645Family b.70.2.1: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase [51005] (1 protein)
  6. 2066646Protein C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase [51006] (3 species)
    the N-terminal domain is cytochrome c-like

Species:

  1. 2066647Paracoccus denitrificans [TaxId:266] [51009] (2 PDB entries)
    1. Domains for 1e2r:
      1. 2066650Domain d1e2ra2: 1e2r A:136-567 [27712]
        Other proteins in same PDB: d1e2ra1, d1e2rb1
        complexed with cyn, dhe, gol, hec
      2. 2066651Domain d1e2rb2: 1e2r B:136-567 [27713]
        Other proteins in same PDB: d1e2ra1, d1e2rb1
        complexed with cyn, dhe, gol, hec
    2. Domains for 1qks:
      1. 2066648Domain d1qksa2: 1qks A:136-567 [27710]
        Other proteins in same PDB: d1qksa1, d1qksb1
        complexed with dhe, gol, hec, so4
      2. 2066649Domain d1qksb2: 1qks B:136-567 [27711]
        Other proteins in same PDB: d1qksa1, d1qksb1
        complexed with dhe, gol, hec, so4
  2. 2066652Paracoccus pantotrophus [TaxId:82367] [51007] (11 PDB entries)
    formerly Thiosphaera pantotropha
    1. Domains for 1aof:
      1. 2066667Domain d1aofa2: 1aof A:134-567 [27696]
        Other proteins in same PDB: d1aofa1, d1aofb1
        complexed with dhe, hem, so2
      2. 2066668Domain d1aofb2: 1aof B:134-567 [27697]
        Other proteins in same PDB: d1aofa1, d1aofb1
        complexed with dhe, hem, so2
    2. Domains for 1aom:
      1. 2066665Domain d1aoma1: 1aom A:129-567 [27694]
        Other proteins in same PDB: d1aomb1
        complexed with 2no, dhe, hem, no
      2. 2066666Domain d1aomb2: 1aom B:134-567 [27695]
        Other proteins in same PDB: d1aomb1
        complexed with 2no, dhe, hem, no
    3. Domains for 1aoq:
      1. 2066663Domain d1aoqa2: 1aoq A:134-567 [27692]
        Other proteins in same PDB: d1aoqa1, d1aoqb1
        complexed with 2no, dhe, hem, no
      2. 2066664Domain d1aoqb2: 1aoq B:134-567 [27693]
        Other proteins in same PDB: d1aoqa1, d1aoqb1
        complexed with 2no, dhe, hem, no
    4. Domains for 1dy7:
      1. 2066657Domain d1dy7a_: 1dy7 A: [27686]
        Other proteins in same PDB: d1dy7b1
        complexed with cmo, dhe, gol, hec, so4
      2. 2066658Domain d1dy7b2: 1dy7 B:136-567 [27687]
        Other proteins in same PDB: d1dy7b1
        complexed with cmo, dhe, gol, hec, so4
    5. Domains for 1gq1:
      1. 2066653Domain d1gq1a2: 1gq1 A:134-567 [76265]
        Other proteins in same PDB: d1gq1a1, d1gq1b1
        complexed with dhe, gol, hec, so4; mutant
      2. 2066654Domain d1gq1b2: 1gq1 B:134-567 [76267]
        Other proteins in same PDB: d1gq1a1, d1gq1b1
        complexed with dhe, gol, hec, so4; mutant
    6. Domains for 1h9x:
      1. 2066669Domain d1h9xa2: 1h9x A:134-567 [60856]
        Other proteins in same PDB: d1h9xa1, d1h9xb1
        complexed with dhe, hec, nhe, so4
      2. 2066670Domain d1h9xb2: 1h9x B:134-567 [60858]
        Other proteins in same PDB: d1h9xa1, d1h9xb1
        complexed with dhe, hec, nhe, so4
    7. Domains for 1h9y:
      1. 2066673Domain d1h9ya2: 1h9y A:134-567 [60860]
        Other proteins in same PDB: d1h9ya1, d1h9yb1
        complexed with cyn, dhe, hec, so4
      2. 2066674Domain d1h9yb2: 1h9y B:134-567 [60862]
        Other proteins in same PDB: d1h9ya1, d1h9yb1
        complexed with cyn, dhe, hec, so4
    8. Domains for 1hcm:
      1. 2066671Domain d1hcma2: 1hcm A:134-567 [60959]
        Other proteins in same PDB: d1hcma1, d1hcmb1
        complexed with dhe, hec, so4
      2. 2066672Domain d1hcmb2: 1hcm B:134-567 [60961]
        Other proteins in same PDB: d1hcma1, d1hcmb1
        complexed with dhe, hec, so4
    9. Domains for 1hj3:
      1. 2066659Domain d1hj3a2: 1hj3 A:134-567 [27688]
        Other proteins in same PDB: d1hj3a1, d1hj3b1
        complexed with dhe, gol, hec, oxy, so4
      2. 2066660Domain d1hj3b2: 1hj3 B:134-567 [27689]
        Other proteins in same PDB: d1hj3a1, d1hj3b1
        complexed with dhe, gol, hec, oxy, so4
    10. Domains for 1hj4:
      1. 2066661Domain d1hj4a2: 1hj4 A:134-567 [27690]
        Other proteins in same PDB: d1hj4a1, d1hj4b1
        complexed with dhe, gol, hec, so4
      2. 2066662Domain d1hj4b2: 1hj4 B:134-567 [27691]
        Other proteins in same PDB: d1hj4a1, d1hj4b1
        complexed with dhe, gol, hec, so4
    11. Domains for 1hj5:
      1. 2066655Domain d1hj5a2: 1hj5 A:134-567 [27684]
        Other proteins in same PDB: d1hj5a1, d1hj5b1
        complexed with dhe, gol, hec, so4
      2. 2066656Domain d1hj5b2: 1hj5 B:134-567 [27685]
        Other proteins in same PDB: d1hj5a1, d1hj5b1
        complexed with dhe, gol, hec, so4
  3. 2066675Pseudomonas aeruginosa [TaxId:287] [51008] (9 PDB entries)
    1. Domains for 1bl9:
      1. 2066689Domain d1bl9a2: 1bl9 A:118-543 [27706]
        Other proteins in same PDB: d1bl9a1, d1bl9b1
        complexed with dhe, hec, oh
      2. 2066690Domain d1bl9b2: 1bl9 B:118-543 [27707]
        Other proteins in same PDB: d1bl9a1, d1bl9b1
        complexed with dhe, hec, oh
    2. Domains for 1gjq:
      1. 2066678Domain d1gjqa2: 1gjq A:118-543 [70194]
        Other proteins in same PDB: d1gjqa1, d1gjqb1
        complexed with cyn, dhe, hec
      2. 2066679Domain d1gjqb2: 1gjq B:118-543 [70196]
        Other proteins in same PDB: d1gjqa1, d1gjqb1
        complexed with cyn, dhe, hec
    3. Domain for 1hzu:
    4. Domain for 1hzv:
    5. Domains for 1n15:
      1. 2066683Domain d1n15a2: 1n15 A:118-543 [27702]
        Other proteins in same PDB: d1n15a1, d1n15b1
        complexed with dhe, hec
      2. 2066684Domain d1n15b2: 1n15 B:118-543 [27703]
        Other proteins in same PDB: d1n15a1, d1n15b1
        complexed with dhe, hec
    6. Domains for 1n50:
      1. 2066687Domain d1n50a2: 1n50 A:118-543 [27708]
        Other proteins in same PDB: d1n50a1, d1n50b1
        complexed with dhe, hec
      2. 2066688Domain d1n50b2: 1n50 B:118-543 [27709]
        Other proteins in same PDB: d1n50a1, d1n50b1
        complexed with dhe, hec
    7. Domains for 1n90:
      1. 2066685Domain d1n90a2: 1n90 A:118-543 [27704]
        Other proteins in same PDB: d1n90a1, d1n90b1
        complexed with dhe, hec
      2. 2066686Domain d1n90b2: 1n90 B:118-543 [27705]
        Other proteins in same PDB: d1n90a1, d1n90b1
        complexed with dhe, hec
    8. Domains for 1nir:
      1. 2066676Domain d1nira2: 1nir A:118-543 [27698]
        Other proteins in same PDB: d1nira1, d1nirb1
        complexed with cl, dhe, hec, oh, po4
      2. 2066677Domain d1nirb2: 1nir B:118-543 [27699]
        Other proteins in same PDB: d1nira1, d1nirb1
        complexed with cl, dhe, hec, oh, po4
    9. Domains for 1nno:
      1. 2066681Domain d1nnoa2: 1nno A:118-543 [27700]
        Other proteins in same PDB: d1nnoa1, d1nnob1
        complexed with dhe, hec, no
      2. 2066682Domain d1nnob2: 1nno B:118-543 [27701]
        Other proteins in same PDB: d1nnoa1, d1nnob1
        complexed with dhe, hec, no

More info for Protein C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase from b.70.2.1: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase

Timeline for Protein C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase from b.70.2.1: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase:

  • Protein C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase from b.70.2.1: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase first appeared (with stable ids) in SCOP 1.55
  • Protein C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase from b.70.2.1: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase appears in SCOPe 2.05