Lineage for Family b.62.1.1: Cyclophilin (peptidylprolyl isomerase)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2397365Fold b.62: Cyclophilin-like [50890] (1 superfamily)
    barrel, closed; n=8, S=10; complex topology
  4. 2397366Superfamily b.62.1: Cyclophilin-like [50891] (5 families) (S)
  5. 2397367Family b.62.1.1: Cyclophilin (peptidylprolyl isomerase) [50892] (13 protein domains)
    automatically mapped to Pfam PF00160

Protein Domains:

  1. 2397368Cyclophilin (eukaryotic) [50893] (13 species)
    1. 2397369Species Aspergillus fumigatus [TaxId:5085] [141499] (1 PDB entry)
      Uniprot Q9Y7F6 8-178
    2. 2397371Species Baker's yeast (Saccharomyces cerevisiae), variant A [TaxId:4932] [101878] (1 PDB entry)
      3jb9 chain d is cyclophilin from fission yeast; not included because sids are not case sensitive
    3. 2397374Species Caenorhabditis elegans, isoform 3 [TaxId:6239] [50899] (3 PDB entries)
    4. 2397378Species Caenorhabditis elegans, isoform 5 [TaxId:6239] [82161] (1 PDB entry)
    5. 2397380Species Human (Homo sapiens), U4/U6 snRNP-specific cyclophilin snucyp-20 [TaxId:9606] [50896] (2 PDB entries)
    6. 2397383Species Human (Homo sapiens), variant A [TaxId:9606] [50894] (115 PDB entries)
      Uniprot P05092
    7. 2397552Species Human (Homo sapiens), variant B [TaxId:9606] [50895] (1 PDB entry)
    8. 2397554Species Human (Homo sapiens), variant C [TaxId:9606] [141498] (1 PDB entry)
      Uniprot P45877 32-212
    9. 2397561Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [50900] (2 PDB entries)
    10. 2397565Species Mouse (Mus musculus), variant C [TaxId:10090] [50897] (1 PDB entry)
    11. 2397570Species Nematode (Brugia malayi) [TaxId:6279] [50898] (3 PDB entries)
    12. 2397581Species Plasmodium yoelii [TaxId:5861] [141500] (1 PDB entry)
      Uniprot Q7RSH5 25-210
    13. 2397583Species Trypanosoma cruzi [TaxId:5693] [117269] (2 PDB entries)
      Uniprot Q4DPB9 30-194
  2. 2397591Cyclophilin 40 isomerase domain [63814] (1 species)
    the other domain is formed by TPR repeats
  3. 2397595Cyclophilin-like allergen Mal s 6 [141501] (1 species)
  4. 2397598Cyclophilin-like protein PPIL3B [141509] (1 species)
  5. 2397604Cyclophilin-like protein PY00693 [141507] (1 species)
  6. 2397607Mitochondrial peptidyl-prolyl cis-trans isomerase, cyclophilin F [141511] (1 species)
  7. 2397647Peptidyl-prolyl cis-trans isomerase A, PpiA [50901] (2 species)
    1. 2397648Species Escherichia coli [TaxId:562] [50902] (7 PDB entries)
      Uniprot P20752
    2. 2397658Species Mycobacterium tuberculosis [TaxId:1773] [117270] (1 PDB entry)
      Uniprot P65762
  8. 2397661Peptidyl-prolyl cis-trans isomerase E, PPIE, C-terminal domain [141503] (1 species)
    N-terminal domain belongs to the RBD family (54929)
  9. 2397665Peptidyl-prolyl cis-trans isomerase-like 1, PPIL1 [141517] (1 species)
  10. 2397668Peptidyl-prolyl cis-trans isomerase-like 2, Cyclophilin-60, PPI domain [141505] (1 species)
  11. 2397672Peptidylprolyl isomerase domain and WD repeat-containing protein 1, PPWD1, C-terminal domain [141515] (1 species)
  12. 2397677Putative cyclophilin PFE0505w [141513] (1 species)
    PPWD1 homologue
  13. 2397680automated matches [190077] (18 species)
    not a true protein
    1. 2397681Species Aspergillus fumigatus [TaxId:5085] [187014] (1 PDB entry)
    2. 2397683Species Azotobacter vinelandii [TaxId:322710] [195875] (1 PDB entry)
    3. 2397685Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [186798] (1 PDB entry)
    4. 2397687Species Blood fluke (Schistosoma mansoni) [TaxId:6183] [187342] (2 PDB entries)
    5. 2397690Species Burkholderia pseudomallei [TaxId:320372] [189985] (1 PDB entry)
    6. 2397692Species Catharanthus roseus [TaxId:4058] [256418] (1 PDB entry)
    7. 2397694Species Fungus (Encephalitozoon cuniculi) [TaxId:6035] [226758] (1 PDB entry)
    8. 2397699Species Horse (Equus caballus) [TaxId:9796] [226528] (2 PDB entries)
    9. 2397702Species Human (Homo sapiens) [TaxId:9606] [186915] (15 PDB entries)
    10. 2397726Species Leishmania donovani [TaxId:5661] [187796] (4 PDB entries)
    11. 2397732Species Leishmania donovani [TaxId:981087] [269890] (1 PDB entry)
    12. 2397734Species Leishmania major [TaxId:5664] [187822] (1 PDB entry)
    13. 2397736Species Moniliophthora perniciosa [TaxId:153609] [189814] (2 PDB entries)
    14. 2397740Species Nematode (Brugia malayi) [TaxId:6279] [193907] (1 PDB entry)
    15. 2397742Species Nematode (Caenorhabditis elegans) [TaxId:6239] [187239] (2 PDB entries)
    16. 2397745Species Piriformospora indica [TaxId:65672] [197083] (1 PDB entry)
    17. 2397749Species Rhesus monkey (Macaca mulatta) [TaxId:9544] [189056] (4 PDB entries)
    18. 2397756Species Wheat (Triticum aestivum) [TaxId:4565] [196725] (2 PDB entries)

More info for Family b.62.1.1: Cyclophilin (peptidylprolyl isomerase)

Timeline for Family b.62.1.1: Cyclophilin (peptidylprolyl isomerase):