Lineage for Family b.60.1.1: Retinol binding protein-like

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 957981Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 957982Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. 957983Family b.60.1.1: Retinol binding protein-like [50815] (22 proteins)
    barrel, closed; n=8, S=12, meander

Proteins:

  1. 957984Alpha-crustacyanin [63807] (1 species)
  2. 958000Aphrodisin, a sex pheromone [63805] (1 species)
  3. 958006beta-Lactoglobulin [50827] (3 species)
    1. 958007Species Cow (Bos taurus) [TaxId:9913] [50828] (31 PDB entries)
      Uniprot P02754
    2. 958046Species Pig (Sus scrofa) [TaxId:9823] [50829] (1 PDB entry)
    3. 958048Species Reindeer (Rangifer tarandus) [TaxId:9870] [141461] (1 PDB entry)
      Uniprot P02755 19-180
  4. 958052Bilin-binding protein [50837] (1 species)
  5. 958064Complement protein C8gamma [74998] (1 species)
  6. 958068Histamine binding protein [50839] (1 species)
  7. 958074Hypothetical protein YxeF [159228] (1 species)
  8. 958077Insecticyanin [141462] (1 species)
  9. 958080Lipocalin allergen [50824] (2 species)
    1. 958081Species Cow (Bos taurus), bos d 2 [TaxId:9913] [50825] (1 PDB entry)
    2. 958083Species Horse (Equus caballus), equ c 1 [TaxId:9796] [50826] (1 PDB entry)
  10. 958085Lipocalin q83 [89364] (1 species)
    activated expression by the myc oncogene
  11. 958088Major urinary protein/alpha-2u-globulin [50832] (2 species)
    1. 958089Species Mouse (Mus musculus) [TaxId:10090] [50833] (19 PDB entries)
    2. 958109Species Norway rat (Rattus norvegicus) [TaxId:10116] [50834] (2 PDB entries)
  12. 958118Neutrophil gelatinase-associated lipocalin (NGAL) [50835] (1 species)
  13. 958154Nitrophorin 1 [50841] (1 species)
  14. 958168Nitrophorin 2 (prolixin-s) [50843] (1 species)
  15. 958184Nitrophorin 4 [50845] (1 species)
  16. 958223Odorant-binding protein [50821] (2 species)
    C-termini swapping dimer
    1. 958224Species Cow (Bos taurus) [TaxId:9913] [50822] (8 PDB entries)
    2. 958241Species Pig (Sus scrofa) [TaxId:9823] [50823] (9 PDB entries)
  17. 958259Outer membrane lipoprotein Blc [101861] (1 species)
    bacterial lipocalin
  18. 958263Retinoic acid-binding protein [50830] (1 species)
  19. 958269Retinol binding protein [50816] (5 species)
    1. 958270Species Chicken (Gallus gallus) [TaxId:9031] [50820] (1 PDB entry)
    2. 958273Species Chicken (Gallus gallus), plasma isoform [TaxId:9031] [69297] (1 PDB entry)
    3. 958275Species Cow (Bos taurus) [TaxId:9913] [50817] (13 PDB entries)
    4. 958289Species Human (Homo sapiens) [TaxId:9606] [50819] (7 PDB entries)
    5. 958299Species Pig (Sus scrofa) [TaxId:9823] [50818] (1 PDB entry)
  20. 958301Salivary lipocalin [74996] (1 species)
  21. 958304Von Ebner's gland protein (VEGP, tear lipocalin) [117265] (1 species)
  22. 958311automated matches [190163] (9 species)
    not a true protein
    1. 958312Species Brown ear tick (Rhipicephalus appendiculatus) [TaxId:34631] [189209] (2 PDB entries)
    2. 958317Species Chicken (Gallus gallus) [TaxId:9031] [189846] (1 PDB entry)
    3. 958320Species Cow (Bos taurus) [TaxId:9913] [188392] (1 PDB entry)
    4. 958322Species Escherichia coli [TaxId:562] [187394] (1 PDB entry)
    5. 958325Species Horse (Equus caballus) [TaxId:9796] [189576] (1 PDB entry)
    6. 958328Species Human (Homo sapiens) [TaxId:9606] [188452] (10 PDB entries)
    7. 958349Species Mouse (Mus musculus) [TaxId:10090] [188249] (7 PDB entries)
    8. 958357Species Reindeer (Rangifer tarandus) [TaxId:9870] [186888] (1 PDB entry)
    9. 958363Species Rhodnius prolixus [TaxId:13249] [187425] (1 PDB entry)

More info for Family b.60.1.1: Retinol binding protein-like

Timeline for Family b.60.1.1: Retinol binding protein-like: