SCOPe 2.08: Family b.52.2.3: Cdc48 N-terminal domain-like

Lineage for Family b.52.2.3: Cdc48 N-terminal domain-like

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.52: Double psi beta-barrel [50684] (2 superfamilies)
   barrel, closed; n=6, S=10; complex topology with crossover (psi) loops

4. Superfamily b.52.2: ADC-like [50692] (4 families)

5. Family b.52.2.3: Cdc48 N-terminal domain-like [50708] (4 proteins)

Proteins:

1. Membrane fusion ATPase p97 N-terminal domain , P97-Nn [63796] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [233316] (13 PDB entries)

   2. Species Mouse (Mus musculus) [TaxId:10090] [63797] (5 PDB entries)

2. N-terminal domain of NSF-N, NSF-Nn [50709] (2 species)
   NSF-N, the N-terminal 'functional' domain of the N-ethylmaleimide sensitive fusion protein, consists of two structural domains

   1. Species Baker's yeast (Saccharomyces cerevisiae), sec18p [TaxId:4932] [50711] (1 PDB entry)

   2. Species Chinese hamster (Cricetulus griseus) [TaxId:10029] [50710] (2 PDB entries)

3. N-terminal domain of VAT-N, VAT-Nn [50712] (1 species)
   VAT-N is the N-terminal 'functional' domain of the VCP-like ATPase

   • Species Thermoplasma acidophilum [TaxId:2303] [50713] (2 PDB entries)

4. Peroxisome biogenesis factor 1 (PEX-1), N-terminal domain [110252] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [110253] (1 PDB entry)
     Uniprot Q5BL07 13-179

More info for Family b.52.2.3: Cdc48 N-terminal domain-like

Timeline for Family b.52.2.3: Cdc48 N-terminal domain-like:

• Family b.52.2.3: Cdc48 N-terminal domain-like first appeared (with stable ids) in SCOP 1.55
  
• Family b.52.2.3: Cdc48 N-terminal domain-like appears in SCOPe 2.07