SCOPe 2.08: Family b.52.2.2: Formate dehydrogenase/DMSO reductase, C-terminal domain

Lineage for Family b.52.2.2: Formate dehydrogenase/DMSO reductase, C-terminal domain

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.52: Double psi beta-barrel [50684] (2 superfamilies)
   barrel, closed; n=6, S=10; complex topology with crossover (psi) loops

4. Superfamily b.52.2: ADC-like [50692] (4 families)

5. Family b.52.2.2: Formate dehydrogenase/DMSO reductase, C-terminal domain [50696] (10 proteins)
   molybdopterine enzyme

Proteins:

1. Arsenite oxidase large subunit [50704] (1 species)

   • Species Alcaligenes faecalis [TaxId:511] [50705] (2 PDB entries)

2. Dimethylsulfoxide reductase (DMSO reductase) [50697] (2 species)

   1. Species Rhodobacter capsulatus [TaxId:1061] [50699] (10 PDB entries)

   2. Species Rhodobacter sphaeroides [TaxId:1063] [50698] (1 PDB entry)

3. Formate dehydrogenase H [50700] (1 species)

   • Species Escherichia coli [TaxId:562] [50701] (4 PDB entries)

4. Formate dehydrogenase N, alpha subunit [74987] (1 species)

   • Species Escherichia coli [TaxId:562] [74988] (2 PDB entries)

5. NADH-quinone oxidoreductase chain 3, Nqo3, C-terminal domain [141393] (1 species)
   topoisomer of the common fold, lacking the second psi loop

   • Species Thermus thermophilus [TaxId:274] [141394] (1 PDB entry)
     Uniprot Q56223 686-767

6. Periplasmic nitrate reductase alpha chain, NapA [50706] (2 species)

   1. Species Desulfovibrio desulfuricans [TaxId:876] [50707] (5 PDB entries)
      dissimilatory nitrate reductase (NAP)

   2. Species Rhodobacter sphaeroides [TaxId:1063] [101827] (1 PDB entry)

7. Respiratory nitrate reductase 1 alpha chain [101828] (1 species)

   • Species Escherichia coli [TaxId:562] [101829] (7 PDB entries)
     Uniprot P09152

8. Transhydroxylase alpha subunit, AthL [110250] (1 species)

   • Species Pelobacter acidigallici [TaxId:35816] [110251] (6 PDB entries)
     Uniprot P80563

9. Trimethylamine N-oxide reductase [50702] (1 species)

   • Species Shewanella massilia [TaxId:76854] [50703] (1 PDB entry)

10. Tungsten containing formate dehydrogenase, large subunit [82138] (1 species)

    • Species Desulfovibrio gigas [TaxId:879] [82139] (1 PDB entry)

More info for Family b.52.2.2: Formate dehydrogenase/DMSO reductase, C-terminal domain

Timeline for Family b.52.2.2: Formate dehydrogenase/DMSO reductase, C-terminal domain:

• Family b.52.2.2: Formate dehydrogenase/DMSO reductase, C-terminal domain first appeared (with stable ids) in SCOP 1.55
  
• Family b.52.2.2: Formate dehydrogenase/DMSO reductase, C-terminal domain appears in SCOPe 2.07