SCOP 1.61: Protein: Human immunodeficiency virus type 1 protease

Lineage for Protein: Human immunodeficiency virus type 1 protease

Root: SCOP 1.61
Class b: All beta proteins [48724] (111 folds)
Fold b.50: Acid proteases [50629] (1 superfamily)
Superfamily b.50.1: Acid proteases [50630] (2 families)
Family b.50.1.1: Retroviral protease (retropepsin) [50631] (7 proteins)
Protein Human immunodeficiency virus type 1 protease [50632] (1 species)

Species:

Human immunodeficiency virus type 1 [TaxId:11676] [50633] (141 PDB entries)
1. Domains for 1a30:
  1. Domain d1a30a_: 1a30 A: [26553]
  2. Domain d1a30b_: 1a30 B: [26554]
2. Domains for 1a8g:
  1. Domain d1a8ga_: 1a8g A: [26660]
  2. Domain d1a8gb_: 1a8g B: [26661]
3. Domains for 1a8k:
  1. Domain d1a8ka_: 1a8k A: [26625]
  2. Domain d1a8kb_: 1a8k B: [26626]
  3. Domain d1a8kd_: 1a8k D: [26627]
  4. Domain d1a8ke_: 1a8k E: [26628]
4. Domains for 1a94:
  1. Domain d1a94a_: 1a94 A: [26599]
  2. Domain d1a94b_: 1a94 B: [26600]
  3. Domain d1a94d_: 1a94 D: [26601]
  4. Domain d1a94e_: 1a94 E: [26602]
5. Domains for 1a9m:
  1. Domain d1a9ma_: 1a9m A: [26642]
  2. Domain d1a9mb_: 1a9m B: [26643]
6. Domains for 1aaq:
  1. Domain d1aaqa_: 1aaq A: [26688]
  2. Domain d1aaqb_: 1aaq B: [26689]
7. Domains for 1aid:
  1. Domain d1aida_: 1aid A: [26591]
  2. Domain d1aidb_: 1aid B: [26592]
8. Domains for 1ajv:
  1. Domain d1ajva_: 1ajv A: [26561]
  2. Domain d1ajvb_: 1ajv B: [26562]
9. Domains for 1ajx:
  1. Domain d1ajxa_: 1ajx A: [26527]
  2. Domain d1ajxb_: 1ajx B: [26528]
10. Domains for 1axa:
  1. Domain d1axaa_: 1axa A: [26633]
  2. Domain d1axab_: 1axa B: [26634]
11. Domains for 1b6j:
  1. Domain d1b6ja_: 1b6j A: [26567]
  2. Domain d1b6jb_: 1b6j B: [26568]
12. Domains for 1b6k:
  1. Domain d1b6ka_: 1b6k A: [26619]
  2. Domain d1b6kb_: 1b6k B: [26620]
13. Domains for 1b6l:
  1. Domain d1b6la_: 1b6l A: [26571]
  2. Domain d1b6lb_: 1b6l B: [26572]
14. Domains for 1b6m:
  1. Domain d1b6ma_: 1b6m A: [26621]
  2. Domain d1b6mb_: 1b6m B: [26622]
15. Domains for 1b6n:
  1. Domain d1b6na_: 1b6n A: [26595]
  2. Domain d1b6nb_: 1b6n B: [26596]
16. Domains for 1b6o:
  1. Domain d1b6oa_: 1b6o A: [26587]
  2. Domain d1b6ob_: 1b6o B: [26588]
17. Domains for 1b6p:
  1. Domain d1b6pa_: 1b6p A: [26635]
  2. Domain d1b6pb_: 1b6p B: [26636]
18. Domains for 1bdl:
  1. Domain d1bdla_: 1bdl A: [26705]
  2. Domain d1bdlb_: 1bdl B: [26706]
19. Domains for 1bdq:
  1. Domain d1bdqa_: 1bdq A: [26686]
  2. Domain d1bdqb_: 1bdq B: [26687]
20. Domains for 1bdr:
  1. Domain d1bdra_: 1bdr A: [26702]
  2. Domain d1bdrb_: 1bdr B: [26703]
21. Domains for 1bv7:
  1. Domain d1bv7a_: 1bv7 A: [26629]
  2. Domain d1bv7b_: 1bv7 B: [26630]
22. Domains for 1bv9:
  1. Domain d1bv9a_: 1bv9 A: [26615]
  2. Domain d1bv9b_: 1bv9 B: [26616]
23. Domains for 1bve:
  1. Domain d1bvea_: 1bve A: [26713]
  2. Domain d1bveb_: 1bve B: [26714]
24. Domains for 1bvg:
  1. Domain d1bvga_: 1bvg A: [26710]
  2. Domain d1bvgb_: 1bvg B: [26711]
25. Domains for 1bwa:
  1. Domain d1bwaa_: 1bwa A: [26589]
  2. Domain d1bwab_: 1bwa B: [26590]
26. Domains for 1bwb:
  1. Domain d1bwba_: 1bwb A: [26517]
  2. Domain d1bwbb_: 1bwb B: [26518]
27. Domains for 1c6x:
  1. Domain d1c6xa_: 1c6x A: [26694]
  2. Domain d1c6xb_: 1c6x B: [26695]
28. Domains for 1c6y:
  1. Domain d1c6ya_: 1c6y A: [26670]
  2. Domain d1c6yb_: 1c6y B: [26671]
29. Domains for 1c6z:
  1. Domain d1c6za_: 1c6z A: [26668]
  2. Domain d1c6zb_: 1c6z B: [26669]
30. Domains for 1c70:
  1. Domain d1c70a_: 1c70 A: [26652]
  2. Domain d1c70b_: 1c70 B: [26653]
31. Domains for 1cpi:
  1. Domain d1cpia_: 1cpi A: [26569]
  2. Domain d1cpib_: 1cpi B: [26570]
32. Domains for 1d4h:
  1. Domain d1d4ha_: 1d4h A: [70074]
  2. Domain d1d4hb_: 1d4h B: [70075]
33. Domains for 1d4i:
  1. Domain d1d4ia_: 1d4i A: [70076]
  2. Domain d1d4ib_: 1d4i B: [70077]
34. Domains for 1d4j:
  1. Domain d1d4ja_: 1d4j A: [70078]
  2. Domain d1d4jb_: 1d4j B: [70079]
35. Domains for 1d4k:
  1. Domain d1d4ka_: 1d4k A: [26543]
  2. Domain d1d4kb_: 1d4k B: [26544]
36. Domains for 1d4l:
  1. Domain d1d4la_: 1d4l A: [26505]
  2. Domain d1d4lb_: 1d4l B: [26506]
37. Domains for 1d4s:
  1. Domain d1d4sa_: 1d4s A: [26692]
  2. Domain d1d4sb_: 1d4s B: [26693]
38. Domains for 1d4y:
  1. Domain d1d4ya_: 1d4y A: [26549]
  2. Domain d1d4yb_: 1d4y B: [26550]
39. Domains for 1daz:
  1. Domain d1dazc_: 1daz C: [26501]
  2. Domain d1dazd_: 1daz D: [26502]
40. Domains for 1dif:
  1. Domain d1difa_: 1dif A: [26503]
  2. Domain d1difb_: 1dif B: [26504]
41. Domains for 1dmp:
  1. Domain d1dmpa_: 1dmp A: [26638]
  2. Domain d1dmpb_: 1dmp B: [26639]
42. Domains for 1dw6:
  1. Domain d1dw6c_: 1dw6 C: [26545]
  2. Domain d1dw6d_: 1dw6 D: [26546]
43. Domains for 1ebk:
  1. Domain d1ebkc_: 1ebk C: [26610]
  2. Domain d1ebkd_: 1ebk D: [26611]
  3. Domain d1ebke_: 1ebk E: [26612]
  4. Domain d1ebkf_: 1ebk F: [26613]
44. Domains for 1ebw:
  1. Domain d1ebwa_: 1ebw A: [70114]
  2. Domain d1ebwb_: 1ebw B: [70115]
45. Domains for 1eby:
  1. Domain d1ebya_: 1eby A: [70116]
  2. Domain d1ebyb_: 1eby B: [70117]
46. Domains for 1ebz:
  1. Domain d1ebza_: 1ebz A: [70118]
  2. Domain d1ebzb_: 1ebz B: [70119]
47. Domains for 1ec0:
  1. Domain d1ec0a_: 1ec0 A: [70120]
  2. Domain d1ec0b_: 1ec0 B: [70121]
48. Domains for 1ec1:
  1. Domain d1ec1a_: 1ec1 A: [70122]
  2. Domain d1ec1b_: 1ec1 B: [70123]
49. Domains for 1ec2:
  1. Domain d1ec2a_: 1ec2 A: [70124]
  2. Domain d1ec2b_: 1ec2 B: [70125]
50. Domains for 1ec3:
  1. Domain d1ec3a_: 1ec3 A: [70126]
  2. Domain d1ec3b_: 1ec3 B: [70127]
51. Domains for 1f7a:
  1. Domain d1f7aa_: 1f7a A: [59664]
  2. Domain d1f7ab_: 1f7a B: [59665]
52. Domain for 1fb7:
  - Domain d1fb7a_: 1fb7 A: [26683]
53. Domains for 1fej:
  1. Domain d1fejc_: 1fej C: [59798]
  2. Domain d1fejd_: 1fej D: [59799]
54. Domains for 1ff0:
  1. Domain d1ff0c_: 1ff0 C: [59804]
  2. Domain d1ff0d_: 1ff0 D: [59805]
55. Domains for 1fff:
  1. Domain d1fffc_: 1fff C: [59806]
  2. Domain d1fffd_: 1fff D: [59807]
56. Domains for 1ffi:
  1. Domain d1ffic_: 1ffi C: [59808]
  2. Domain d1ffid_: 1ffi D: [59809]
57. Domains for 1fg6:
  1. Domain d1fg6c_: 1fg6 C: [59817]
  2. Domain d1fg6d_: 1fg6 D: [59818]
58. Domains for 1fg8:
  1. Domain d1fg8c_: 1fg8 C: [59820]
  2. Domain d1fg8d_: 1fg8 D: [59821]
59. Domains for 1fgc:
  1. Domain d1fgcc_: 1fgc C: [59822]
  2. Domain d1fgcd_: 1fgc D: [59823]
60. Domains for 1fqx:
  1. Domain d1fqxa_: 1fqx A: [59994]
  2. Domain d1fqxb_: 1fqx B: [59995]
61. Domains for 1g2k:
  1. Domain d1g2ka_: 1g2k A: [60225]
  2. Domain d1g2kb_: 1g2k B: [60226]
62. Domains for 1g35:
  1. Domain d1g35a_: 1g35 A: [60232]
  2. Domain d1g35b_: 1g35 B: [60233]
63. Domains for 1g6l:
  1. Domain d1g6la1: 1g6l A:1-99 [26559]
  2. Domain d1g6la2: 1g6l A:1001-1099 [26560]
64. Domains for 1gnm:
  1. Domain d1gnma_: 1gnm A: [26672]
  2. Domain d1gnmb_: 1gnm B: [26673]
65. Domains for 1gnn:
  1. Domain d1gnna_: 1gnn A: [26676]
  2. Domain d1gnnb_: 1gnn B: [26677]
66. Domains for 1gno:
  1. Domain d1gnoa_: 1gno A: [26658]
  2. Domain d1gnob_: 1gno B: [26659]
67. Domains for 1hbv:
  1. Domain d1hbva_: 1hbv A: [26646]
  2. Domain d1hbvb_: 1hbv B: [26647]
68. Domain for 1hef:
  - Domain d1hefe_: 1hef E: [26637]
69. Domain for 1heg:
  - Domain d1hege_: 1heg E: [26664]
70. Domain for 1hhp:
  - Domain d1hhp__: 1hhp - [26680]
71. Domains for 1hih:
  1. Domain d1hiha_: 1hih A: [26539]
  2. Domain d1hihb_: 1hih B: [26540]
72. Domains for 1hiv:
  1. Domain d1hiva_: 1hiv A: [26555]
  2. Domain d1hivb_: 1hiv B: [26556]
73. Domains for 1hos:
  1. Domain d1hosa_: 1hos A: [26644]
  2. Domain d1hosb_: 1hos B: [26645]
74. Domains for 1hpo:
  1. Domain d1hpoa_: 1hpo A: [26648]
  2. Domain d1hpob_: 1hpo B: [26649]
75. Domains for 1hps:
  1. Domain d1hpsa_: 1hps A: [26674]
  2. Domain d1hpsb_: 1hps B: [26675]
76. Domains for 1hpv:
  1. Domain d1hpva_: 1hpv A: [26547]
  2. Domain d1hpvb_: 1hpv B: [26548]
77. Domains for 1hpx:
  1. Domain d1hpxa_: 1hpx A: [26521]
  2. Domain d1hpxb_: 1hpx B: [26522]
78. Domains for 1hsg:
  1. Domain d1hsga_: 1hsg A: [26541]
  2. Domain d1hsgb_: 1hsg B: [26542]
79. Domains for 1hsh:
  1. Domain d1hsha_: 1hsh A: [26563]
  2. Domain d1hshb_: 1hsh B: [26564]
  3. Domain d1hshc_: 1hsh C: [26565]
  4. Domain d1hshd_: 1hsh D: [26566]
80. Domains for 1hte:
  1. Domain d1htea_: 1hte A: [26698]
  2. Domain d1hteb_: 1hte B: [26699]
81. Domains for 1htf:
  1. Domain d1htfa_: 1htf A: [26656]
  2. Domain d1htfb_: 1htf B: [26657]
82. Domains for 1htg:
  1. Domain d1htga_: 1htg A: [26583]
  2. Domain d1htgb_: 1htg B: [26584]
83. Domain for 1hvc:
  - Domain d1hvc__: 1hvc - [26614]
84. Domains for 1hvh:
  1. Domain d1hvha_: 1hvh A: [26585]
  2. Domain d1hvhb_: 1hvh B: [26586]
85. Domains for 1hvi:
  1. Domain d1hvia_: 1hvi A: [26511]
  2. Domain d1hvib_: 1hvi B: [26512]
86. Domains for 1hvj:
  1. Domain d1hvja_: 1hvj A: [26525]
  2. Domain d1hvjb_: 1hvj B: [26526]
87. Domains for 1hvk:
  1. Domain d1hvka_: 1hvk A: [26513]
  2. Domain d1hvkb_: 1hvk B: [26514]
88. Domains for 1hvl:
  1. Domain d1hvla_: 1hvl A: [26519]
  2. Domain d1hvlb_: 1hvl B: [26520]
89. Domains for 1hvr:
  1. Domain d1hvra_: 1hvr A: [26533]
  2. Domain d1hvrb_: 1hvr B: [26534]
90. Domains for 1hvs:
  1. Domain d1hvsa_: 1hvs A: [26597]
  2. Domain d1hvsb_: 1hvs B: [26598]
91. Domains for 1hwr:
  1. Domain d1hwra_: 1hwr A: [26579]
  2. Domain d1hwrb_: 1hwr B: [26580]
92. Domains for 1hxb:
  1. Domain d1hxba_: 1hxb A: [26623]
  2. Domain d1hxbb_: 1hxb B: [26624]
93. Domains for 1hxw:
  1. Domain d1hxwa_: 1hxw A: [26515]
  2. Domain d1hxwb_: 1hxw B: [26516]
94. Domains for 1iiq:
  1. Domain d1iiqa_: 1iiq A: [71227]
  2. Domain d1iiqb_: 1iiq B: [71228]
95. Domains for 1k1t:
  1. Domain d1k1ta_: 1k1t A: [71995]
  2. Domain d1k1tb_: 1k1t B: [71996]
96. Domains for 1k1u:
  1. Domain d1k1ua_: 1k1u A: [71997]
  2. Domain d1k1ub_: 1k1u B: [71998]
97. Domains for 1k2b:
  1. Domain d1k2ba_: 1k2b A: [72006]
  2. Domain d1k2bb_: 1k2b B: [72007]
98. Domains for 1k2c:
  1. Domain d1k2ca_: 1k2c A: [72008]
  2. Domain d1k2cb_: 1k2c B: [72009]
99. Domains for 1kj4:
  1. Domain d1kj4a_: 1kj4 A: [72575]
  2. Domain d1kj4b_: 1kj4 B: [72576]
  3. Domain d1kj4c_: 1kj4 C: [72577]
  4. Domain d1kj4d_: 1kj4 D: [72578]
100. Domains for 1kj7:
  1. Domain d1kj7a_: 1kj7 A: [72581]
  2. Domain d1kj7b_: 1kj7 B: [72582]
101. Domains for 1kjf:
  1. Domain d1kjfa_: 1kjf A: [72595]
  2. Domain d1kjfb_: 1kjf B: [72596]
102. Domains for 1kjg:
  1. Domain d1kjga_: 1kjg A: [72597]
  2. Domain d1kjgb_: 1kjg B: [72598]
103. Domains for 1kjh:
  1. Domain d1kjha_: 1kjh A: [72599]
  2. Domain d1kjhb_: 1kjh B: [72600]
104. Domains for 1kzk:
  1. Domain d1kzka_: 1kzk A: [73371]
  2. Domain d1kzkb_: 1kzk B: [73372]
105. Domains for 1lv1:
  1. Domain d1lv1a1: 1lv1 A:1-99 [74273]
  2. Domain d1lv1a2: 1lv1 A:1001-1099 [74274]
106. Domains for 1mer:
  1. Domain d1mera_: 1mer A: [26523]
  2. Domain d1merb_: 1mer B: [26524]
107. Domains for 1mes:
  1. Domain d1mesa_: 1mes A: [26557]
  2. Domain d1mesb_: 1mes B: [26558]
108. Domains for 1met:
  1. Domain d1meta_: 1met A: [26593]
  2. Domain d1metb_: 1met B: [26594]
109. Domains for 1meu:
  1. Domain d1meua_: 1meu A: [26573]
  2. Domain d1meub_: 1meu B: [26574]
110. Domains for 1mtr:
  1. Domain d1mtra_: 1mtr A: [26507]
  2. Domain d1mtrb_: 1mtr B: [26508]
111. Domains for 1odw:
  1. Domain d1odwa_: 1odw A: [26617]
  2. Domain d1odwb_: 1odw B: [26618]
112. Domains for 1odx:
  1. Domain d1odxa_: 1odx A: [26577]
  2. Domain d1odxb_: 1odx B: [26578]
113. Domains for 1ody:
  1. Domain d1odya_: 1ody A: [26581]
  2. Domain d1odyb_: 1ody B: [26582]
114. Domains for 1ohr:
  1. Domain d1ohra_: 1ohr A: [26603]
  2. Domain d1ohrb_: 1ohr B: [26604]
115. Domains for 1pro:
  1. Domain d1proa_: 1pro A: [26509]
  2. Domain d1prob_: 1pro B: [26510]
116. Domains for 1qbr:
  1. Domain d1qbra_: 1qbr A: [26535]
  2. Domain d1qbrb_: 1qbr B: [26536]
117. Domains for 1qbs:
  1. Domain d1qbsa_: 1qbs A: [26531]
  2. Domain d1qbsb_: 1qbs B: [26532]
118. Domains for 1qbt:
  1. Domain d1qbta_: 1qbt A: [26631]
  2. Domain d1qbtb_: 1qbt B: [26632]
119. Domains for 1qbu:
  1. Domain d1qbua_: 1qbu A: [26575]
  2. Domain d1qbub_: 1qbu B: [26576]
120. Domains for 1sbg:
  1. Domain d1sbga_: 1sbg A: [26640]
  2. Domain d1sbgb_: 1sbg B: [26641]
121. Domain for 1upj:
  - Domain d1upj__: 1upj - [26665]
122. Domains for 1vij:
  1. Domain d1vija_: 1vij A: [26700]
  2. Domain d1vijb_: 1vij B: [26701]
123. Domains for 1vik:
  1. Domain d1vika_: 1vik A: [26684]
  2. Domain d1vikb_: 1vik B: [26685]
124. Domains for 2aid:
  1. Domain d2aida_: 2aid A: [26529]
  2. Domain d2aidb_: 2aid B: [26530]
125. Domains for 2bpv:
  1. Domain d2bpva_: 2bpv A: [26537]
  2. Domain d2bpvb_: 2bpv B: [26538]
126. Domains for 2bpw:
  1. Domain d2bpwa_: 2bpw A: [26678]
  2. Domain d2bpwb_: 2bpw B: [26679]
127. Domains for 2bpx:
  1. Domain d2bpxa_: 2bpx A: [26690]
  2. Domain d2bpxb_: 2bpx B: [26691]
128. Domains for 2bpy:
  1. Domain d2bpya_: 2bpy A: [26551]
  2. Domain d2bpyb_: 2bpy B: [26552]
129. Domains for 2bpz:
  1. Domain d2bpza_: 2bpz A: [26650]
  2. Domain d2bpzb_: 2bpz B: [26651]
130. Domain for 2hvp:
  - Domain d2hvp__: 2hvp - [26712]
131. Domains for 2upj:
  1. Domain d2upja_: 2upj A: [26696]
  2. Domain d2upjb_: 2upj B: [26697]
132. Domains for 3aid:
  1. Domain d3aida_: 3aid A: [26681]
  2. Domain d3aidb_: 3aid B: [26682]
133. Domain for 3hvp:
  - Domain d3hvp__: 3hvp - [26704]
134. Domain for 3phv:
  - Domain d3phv__: 3phv - [26707]
135. Domain for 3tlh:
  - Domain d3tlha_: 3tlh A: [26609]
136. Domains for 4hvp:
  1. Domain d4hvpa_: 4hvp A: [26662]
  2. Domain d4hvpb_: 4hvp B: [26663]
137. Domains for 4phv:
  1. Domain d4phva_: 4phv A: [26607]
  2. Domain d4phvb_: 4phv B: [26608]
138. Domains for 5hvp:
  1. Domain d5hvpa_: 5hvp A: [26605]
  2. Domain d5hvpb_: 5hvp B: [26606]
139. Domains for 7hvp:
  1. Domain d7hvpa_: 7hvp A: [26654]
  2. Domain d7hvpb_: 7hvp B: [26655]
140. Domains for 8hvp:
  1. Domain d8hvpa_: 8hvp A: [26666]
  2. Domain d8hvpb_: 8hvp B: [26667]
141. Domains for 9hvp:
  1. Domain d9hvpa_: 9hvp A: [26708]
  2. Domain d9hvpb_: 9hvp B: [26709]

More info for Protein Human immunodeficiency virus type 1 protease from b.50.1.1: Retroviral protease (retropepsin)

Timeline for Protein Human immunodeficiency virus type 1 protease from b.50.1.1: Retroviral protease (retropepsin):

Protein Human immunodeficiency virus type 1 protease from b.50.1.1: Retroviral protease (retropepsin) first appeared (with stable ids) in SCOP 1.55
Protein Human immunodeficiency virus type 1 protease from b.50.1.1: Retroviral protease (retropepsin) appears in SCOP 1.59
Protein Human immunodeficiency virus type 1 protease from b.50.1.1: Retroviral protease (retropepsin) appears in SCOP 1.63
Protein Human immunodeficiency virus type 1 protease from b.50.1.1: Retroviral protease (retropepsin) appears in the current release, SCOPe 2.08