SCOP 1.67: Protein: Eukaryotic ornithine decarboxylase (ODC)

Lineage for Protein: Eukaryotic ornithine decarboxylase (ODC)

Root: SCOP 1.67
Class b: All beta proteins [48724] (141 folds)
Fold b.49: Domain of alpha and beta subunits of F1 ATP synthase-like [50614] (3 superfamilies)
barrel, closed; n=6, S=8; greek-key
Superfamily b.49.2: Alanine racemase C-terminal domain-like [50621] (2 families)
the barrel is decorated with additional structures
Family b.49.2.3: Eukaryotic ODC-like [88683] (2 proteins)
barrel is open with strands 4 and 5 having swapped their positions, compared to the alanine racemase barrel
Protein Eukaryotic ornithine decarboxylase (ODC) [50625] (3 species)

Species:

Human (Homo sapiens) [TaxId:9606] [50626] (1 PDB entry)
- Domains for 1d7k:
  1. Domain d1d7ka1: 1d7k A:7-43,A:284-427 [26486]
    Other proteins in same PDB: d1d7ka2, d1d7kb2
  2. Domain d1d7kb1: 1d7k B:7-43,B:284-421 [26487]
    Other proteins in same PDB: d1d7ka2, d1d7kb2
Mouse (Mus musculus) [TaxId:10090] [50627] (1 PDB entry)
- Domain for 7odc:
  - Domain d7odca1: 7odc A:2-43,A:284-418 [26488]
    Other proteins in same PDB: d7odca2
    complexed with plp; mutant
Trypanosoma brucei [TaxId:5691] [50628] (4 PDB entries)
1. Domains for 1f3t:
  1. Domain d1f3ta1: 1f3t A:14-43,A:284-422 [26493]
    Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
  2. Domain d1f3tb1: 1f3t B:14-43,B:284-422 [26494]
    Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
  3. Domain d1f3tc1: 1f3t C:14-43,C:284-409 [26495]
    Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
  4. Domain d1f3td1: 1f3t D:14-43,D:284-409 [26496]
    Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
    complexed with plp, put
2. Domains for 1njj:
  1. Domain d1njja1: 1njj A:20-43,A:284-414 [91905]
    Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
  2. Domain d1njjb1: 1njj B:20-43,B:284-409 [91907]
    Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
  3. Domain d1njjc1: 1njj C:14-43,C:284-409 [91909]
    Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
  4. Domain d1njjd1: 1njj D:20-43,D:284-409 [91911]
    Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
    complexed with get, orx
3. Domains for 1qu4:
  1. Domain d1qu4a1: 1qu4 A:35-43,A:284-411 [26497]
    Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
  2. Domain d1qu4b1: 1qu4 B:35-43,B:284-411 [26498]
    Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
  3. Domain d1qu4c1: 1qu4 C:35-43,C:284-411 [26499]
    Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
  4. Domain d1qu4d1: 1qu4 D:35-43,D:284-411 [26500]
    Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
4. Domains for 2tod:
  1. Domain d2toda1: 2tod A:37-43,A:284-410 [26489]
    Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
  2. Domain d2todb1: 2tod B:37-43,B:284-410 [26490]
    Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
  3. Domain d2todc1: 2tod C:37-43,C:284-410 [26491]
    Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
  4. Domain d2todd1: 2tod D:37-43,D:284-410 [26492]
    Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2

More info for Protein Eukaryotic ornithine decarboxylase (ODC) from b.49.2.3: Eukaryotic ODC-like

Timeline for Protein Eukaryotic ornithine decarboxylase (ODC) from b.49.2.3: Eukaryotic ODC-like:

Protein Eukaryotic ornithine decarboxylase (ODC) from b.49.2.3: Eukaryotic ODC-like first appeared (with stable ids) in SCOP 1.55, called Protein Eukaryotic ornithine decarboxylase from b.49.2.1: Alanine racemase-like, C-terminal domain
Protein Eukaryotic ornithine decarboxylase (ODC) from b.49.2.3: Eukaryotic ODC-like appears in SCOP 1.65
Protein Eukaryotic ornithine decarboxylase (ODC) from b.49.2.3: Eukaryotic ODC-like appears in SCOP 1.69
Protein Eukaryotic ornithine decarboxylase (ODC) from b.49.2.3: Eukaryotic ODC-like appears in the current release, SCOPe 2.08