Lineage for Family b.47.1.4: Viral cysteine protease of trypsin fold

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1793083Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 1793084Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 1795288Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (4 proteins)

Proteins:

  1. 17952892A cysteine proteinase [50607] (1 species)
  2. 17952933C cysteine protease (picornain 3C) [50604] (9 species)
    1. 1795294Species Foot-and-mouth disease virus [TaxId:12110] [159189] (2 PDB entries)
      Uniprot P49303 1657-1755! Uniprot P49303 1657-1857
    2. 1795297Species Human coxsackievirus a16 [TaxId:31704] [189721] (3 PDB entries)
    3. 1795301Species Human enterovirus 71 [TaxId:39054] [189720] (3 PDB entries)
    4. 1795316Species Human enterovirus b [TaxId:138949] [189732] (3 PDB entries)
    5. 1795323Species Human hepatitis a virus hu/northern africa/mbb/1978 [TaxId:12100] [186929] (2 PDB entries)
    6. 1795326Species Human hepatitis A virus [TaxId:208726] [50606] (5 PDB entries)
    7. 1795336Species Human poliovirus 1 Mahoney [TaxId:12081] [74978] (2 PDB entries)
    8. 1795341Species Human rhinovirus 2 [TaxId:12130] [50605] (1 PDB entry)
    9. 1795343Species Human rhinovirus sp. [TaxId:169066] [189940] (1 PDB entry)
  3. 1795345Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) [74979] (6 species)
    contains an extra alpha-helical domain
    1. 1795346Species Human coronavirus 229E [TaxId:11137] [89348] (2 PDB entries)
    2. 1795351Species Human coronavirus [TaxId:443239] [188597] (2 PDB entries)
    3. 1795358Species Porcine transmissible gastroenteritis coronavirus [TaxId:11151] [193539] (1 PDB entry)
    4. 1795363Species Sars coronavirus sin2774 [TaxId:235410] [187498] (2 PDB entries)
    5. 1795366Species SARS coronavirus [TaxId:227859] [89349] (65 PDB entries)
    6. 1795456Species Transmissible gastroenteritis virus [TaxId:11149] [74980] (3 PDB entries)
  4. 1795471automated matches [190384] (12 species)
    not a true protein
    1. 1795472Species Coxsackievirus b3 [TaxId:103903] [188647] (1 PDB entry)
    2. 1795474Species Enterovirus a71 [TaxId:39054] [279546] (1 PDB entry)
    3. 1795476Species Foot-and-mouth disease virus (strain a10-61) [TaxId:12112] [187901] (1 PDB entry)
    4. 1795478Species Foot-and-mouth disease virus [TaxId:12110] [187460] (1 PDB entry)
    5. 1795480Species Foot-and-mouth disease virus [TaxId:12112] [189099] (2 PDB entries)
    6. 1795487Species Human coxsackievirus B3 [TaxId:12072] [188738] (7 PDB entries)
    7. 1795497Species Human coxsackievirus [TaxId:12072] [188739] (11 PDB entries)
    8. 1795511Species Human enterovirus [TaxId:42789] [196804] (9 PDB entries)
    9. 1795521Species Human poliovirus 1 [TaxId:12081] [193776] (1 PDB entry)
    10. 1795523Species Human sars coronavirus [TaxId:227859] [187234] (1 PDB entry)
    11. 1795526Species Rhinovirus c [TaxId:463676] [255484] (1 PDB entry)
    12. 1795528Species SARS coronavirus [TaxId:227859] [187411] (12 PDB entries)

More info for Family b.47.1.4: Viral cysteine protease of trypsin fold

Timeline for Family b.47.1.4: Viral cysteine protease of trypsin fold: