SCOPe 2.08: Protein: Coagulation factor IXa, protease domain

Lineage for Protein: Coagulation factor IXa, protease domain

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
barrel, closed; n=6, S=8; greek-key
duplication: consists of two domains of the same fold
Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)
Family b.47.1.2: Eukaryotic proteases [50514] (49 proteins)
Protein Coagulation factor IXa, protease domain [50583] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [50585] (21 PDB entries)
1. Domain for 1rfn:
  - Domain d1rfna_: 1rfn A: [26354]
    Other proteins in same PDB: d1rfnb_
    complexed with ca, pbz, tbu
2. Domain for 2wpi:
  - Domain d2wpis_: 2wpi S: [169544]
    Other proteins in same PDB: d2wpie_
    automated match to d1rfna_
    complexed with ca; mutant
3. Domain for 3kcg:
  - Domain d3kcgh_: 3kcg H: [179265]
    Other proteins in same PDB: d3kcgi_, d3kcgl_
    automated match to d1rfna_
    complexed with ca, mpd
4. Domains for 3lc3:
  1. Domain d3lc3a_: 3lc3 A: [180171]
    Other proteins in same PDB: d3lc3b1, d3lc3b2, d3lc3d1, d3lc3d2
    automated match to d1rfna_
    complexed with ca, iyx
  2. Domain d3lc3c_: 3lc3 C: [180173]
    Other proteins in same PDB: d3lc3b1, d3lc3b2, d3lc3d1, d3lc3d2
    automated match to d1rfna_
    complexed with ca, iyx
5. Domain for 3lc5:
  - Domain d3lc5a_: 3lc5 A: [180175]
    Other proteins in same PDB: d3lc5b_
    automated match to d1rfna_
    complexed with ca, izx
6. Domain for 4yzu:
  - Domain d4yzua_: 4yzu A: [273064]
    Other proteins in same PDB: d4yzub_
    automated match to d3lc3a_
    complexed with 4k6, cl, na, nhe
7. Domain for 4z0k:
  - Domain d4z0ka_: 4z0k A: [273063]
    Other proteins in same PDB: d4z0kb_
    automated match to d3lc3a_
    complexed with 4ln, cl, na, nhe
8. Domain for 4zae:
  - Domain d4zaea_: 4zae A: [273585]
    Other proteins in same PDB: d4zaeb_
    automated match to d3lc3a_
    complexed with 4m1, na, nhe
9. Domain for 5egm:
  - Domain d5egma_: 5egm A: [279476]
    Other proteins in same PDB: d5egmb_
    automated match to d3lc3a_
    complexed with 5ny, na, nhe
10. Domain for 5jb8:
  - Domain d5jb8s_: 5jb8 S: [318019]
    Other proteins in same PDB: d5jb8e_
    automated match to d3lc3a_
    complexed with 0gj, ca, dms
11. Domain for 5jb9:
  - Domain d5jb9s_: 5jb9 S: [318009]
    Other proteins in same PDB: d5jb9e_
    automated match to d3lc3a_
    complexed with 0g6, ca, dms
12. Domain for 5jba:
  - Domain d5jbas_: 5jba S: [318013]
    Other proteins in same PDB: d5jbae_
    automated match to d2wpis_
    complexed with 0g6, ca, dms
13. Domain for 5jbb:
  - Domain d5jbbs_: 5jbb S: [318002]
    Other proteins in same PDB: d5jbbe_
    automated match to d2wpis_
    complexed with 0gj, ca, dms
14. Domain for 5jbc:
  - Domain d5jbcs_: 5jbc S: [318048]
    Other proteins in same PDB: d5jbce_
    automated match to d2wpis_
    complexed with 0g6, ca
15. Domain for 5tno:
  - Domain d5tnoa_: 5tno A: [333527]
    Other proteins in same PDB: d5tnob_
    automated match to d4yzua_
    complexed with na, nhe, unl
16. Domain for 5tnt:
  - Domain d5tnta_: 5tnt A: [333519]
    Other proteins in same PDB: d5tntb_
    automated match to d4yzua_
    complexed with 7gq, na, nhe
17. Domain for 6mv4:
  - Domain d6mv4h_: 6mv4 H: [365170]
    Other proteins in same PDB: d6mv4l1, d6mv4l2
    automated match to d1rfna_
    complexed with ca, cl, edo, fmt, na, pbz, so4
18. Domain for 6x5j:
  - Domain d6x5ja_: 6x5j A: [388393]
    Other proteins in same PDB: d6x5jb_
    automated match to d1rfna_
    complexed with 6nh, cit, gol, na
19. Domain for 6x5l:
  - Domain d6x5la_: 6x5l A: [388473]
    Other proteins in same PDB: d6x5lb_
    automated match to d3lc3a_
    complexed with cit, gol, na, uqg
20. Domain for 6x5p:
  - Domain d6x5pa_: 6x5p A: [388404]
    Other proteins in same PDB: d6x5pb_
    automated match to d5tnta_
    complexed with cit, gol, uqd
21. Domain for 7ahv:
  - Domain d7ahvh_: 7ahv H: [417555]
    Other proteins in same PDB: d7ahva_, d7ahvb_, d7ahvl_
    automated match to d6mv4h_
    complexed with 0gj, ca, so4
Pig (Sus scrofa) [TaxId:9823] [50584] (2 PDB entries)
1. Domain for 1pfx:
  - Domain d1pfxc_: 1pfx C: [26353]
    Other proteins in same PDB: d1pfxl1, d1pfxl2, d1pfxl3
    complexed with 0g6
2. Domain for 1x7a:
  - Domain d1x7ac_: 1x7a C: [121781]
    Other proteins in same PDB: d1x7al1, d1x7al2
    automated match to d1pfxc_
    complexed with 187

More info for Protein Coagulation factor IXa, protease domain from b.47.1.2: Eukaryotic proteases

Timeline for Protein Coagulation factor IXa, protease domain from b.47.1.2: Eukaryotic proteases:

Protein Coagulation factor IXa, protease domain from b.47.1.2: Eukaryotic proteases first appeared (with stable ids) in SCOP 1.55
Protein Coagulation factor IXa, protease domain from b.47.1.2: Eukaryotic proteases appears in SCOPe 2.07