SCOPe 2.01: Species: Human (Homo sapiens) [TaxId: 9606]

Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

Root: SCOPe 2.01
Class b: All beta proteins [48724] (174 folds)
Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
barrel, closed; n=6, S=8; greek-key
duplication: consists of two domains of the same fold
Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)
Family b.47.1.2: Eukaryotic proteases [50514] (48 proteins)
Protein Coagulation factor Xa, protease domain [50574] (2 species)
Species Human (Homo sapiens) [TaxId:9606] [50575] (43 PDB entries)
Uniprot P00742 235-467

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

Domain(s) for 1c5m:
- Domain d1c5md_: 1c5m D: [26338]
  Other proteins in same PDB: d1c5mf_
Domain(s) for 1ezq:
- Domain d1ezqa_: 1ezq A: [26340]
  Other proteins in same PDB: d1ezqb_
  complexed with ca, rpr
Domain(s) for 1f0r:
- Domain d1f0ra_: 1f0r A: [26337]
  Other proteins in same PDB: d1f0rb_
  complexed with 815, ca
Domain(s) for 1f0s:
- Domain d1f0sa_: 1f0s A: [26339]
  Other proteins in same PDB: d1f0sb_
  complexed with ca, pr2
Domain(s) for 1fax:
- Domain d1faxa_: 1fax A: [26345]
  Other proteins in same PDB: d1faxl_
  complexed with ca, dx9
Domain(s) for 1fjs:
- Domain d1fjsa_: 1fjs A: [26336]
  Other proteins in same PDB: d1fjsl_
  complexed with ca, cl, gol, z34
Domain(s) for 1g2l:
- Domain d1g2la_: 1g2l A: [65112]
  Other proteins in same PDB: d1g2lb_
  complexed with ca, t87
Domain(s) for 1g2m:
- Domain d1g2ma_: 1g2m A: [65114]
  Other proteins in same PDB: d1g2mb_
  complexed with ca, r11
Domain(s) for 1hcg:
- Domain d1hcga_: 1hcg A: [26341]
  Other proteins in same PDB: d1hcgb_
Domain(s) for 1ioe:
- Domain d1ioea_: 1ioe A: [90667]
  Other proteins in same PDB: d1ioel_
  complexed with ca, xma
Domain(s) for 1iqe:
- Domain d1iqea_: 1iqe A: [90670]
  Other proteins in same PDB: d1iqel_
  complexed with ca, xmb
Domain(s) for 1iqf:
- Domain d1iqfa_: 1iqf A: [90672]
  Other proteins in same PDB: d1iqfl_
  complexed with ca, xmd
Domain(s) for 1iqg:
- Domain d1iqga_: 1iqg A: [90674]
  Other proteins in same PDB: d1iqgl_
  complexed with ca, xme
Domain(s) for 1iqh:
- Domain d1iqha_: 1iqh A: [90676]
  Other proteins in same PDB: d1iqhl_
  complexed with ca, xmf
Domain(s) for 1iqi:
- Domain d1iqia_: 1iqi A: [90678]
  Other proteins in same PDB: d1iqil_
  complexed with ca, xmg
Domain(s) for 1iqj:
- Domain d1iqja_: 1iqj A: [90680]
  Other proteins in same PDB: d1iqjl_
  complexed with ca, xmh
Domain(s) for 1iqk:
- Domain d1iqka_: 1iqk A: [90682]
  Other proteins in same PDB: d1iqkl_
  complexed with ca, xmi
Domain(s) for 1iql:
- Domain d1iqla_: 1iql A: [90684]
  Other proteins in same PDB: d1iqll_
  complexed with ca, xmj
Domain(s) for 1iqm:
- Domain d1iqma_: 1iqm A: [90686]
  Other proteins in same PDB: d1iqml_
  complexed with ca, xmk
Domain(s) for 1iqn:
- Domain d1iqna_: 1iqn A: [90688]
  Other proteins in same PDB: d1iqnl_
  complexed with ca, xmc
Domain(s) for 1ksn:
- Domain d1ksna_: 1ksn A: [72924]
  Other proteins in same PDB: d1ksnb_
  complexed with ca, fxv
Domain(s) for 1lpg:
- Domain d1lpgb_: 1lpg B: [84667]
  Other proteins in same PDB: d1lpga_
  complexed with ca, ima
Domain(s) for 1lpk:
- Domain d1lpkb_: 1lpk B: [84669]
  Other proteins in same PDB: d1lpka_
  complexed with ca, cbb
Domain(s) for 1lpz:
- Domain d1lpzb_: 1lpz B: [84671]
  Other proteins in same PDB: d1lpza_
  complexed with ca, cmb
Domain(s) for 1lqd:
- Domain d1lqdb_: 1lqd B: [84677]
  Other proteins in same PDB: d1lqda_
  complexed with ca, cmi
Domain(s) for 1mq5:
- Domain d1mq5a_: 1mq5 A: [79400]
  Other proteins in same PDB: d1mq5l_
  complexed with ca, gol, xlc
Domain(s) for 1mq6:
- Domain d1mq6a_: 1mq6 A: [79402]
  Other proteins in same PDB: d1mq6l_
  complexed with ca, gol, xld
Domain(s) for 1nfu:
- Domain d1nfua_: 1nfu A: [80467]
  Other proteins in same PDB: d1nfub_
  complexed with ca, rrp
Domain(s) for 1nfw:
- Domain d1nfwa_: 1nfw A: [80469]
  Other proteins in same PDB: d1nfwb_
  complexed with ca, rrr
Domain(s) for 1nfx:
- Domain d1nfxa_: 1nfx A: [80471]
  Other proteins in same PDB: d1nfxb_
  complexed with ca, rdr
Domain(s) for 1nfy:
- Domain d1nfya_: 1nfy A: [80473]
  Other proteins in same PDB: d1nfyb_
  complexed with ca, rtr
Domain(s) for 1p0s:
- Domain d1p0sh_: 1p0s H: [93873]
  Other proteins in same PDB: d1p0se_, d1p0sl1, d1p0sl2
  complexed with mg, na
Domain(s) for 1v3x:
- Domain d1v3xa_: 1v3x A: [113506]
  Other proteins in same PDB: d1v3xb_
  complexed with ca, d76
Domain(s) for 1xka:
- Domain d1xkac_: 1xka C: [26344]
  Other proteins in same PDB: d1xkal1, d1xkal2
  complexed with 4pp, ca
Domain(s) for 1xkb:
1. Domain d1xkbc_: 1xkb C: [26342]
  Other proteins in same PDB: d1xkba1, d1xkba2, d1xkbb1, d1xkbb2
  complexed with 4pp, ca
2. Domain d1xkbd_: 1xkb D: [26343]
  Other proteins in same PDB: d1xkba1, d1xkba2, d1xkbb1, d1xkbb2
  complexed with 4pp, ca
Domain(s) for 2bq6:
- Domain d2bq6b1: 2bq6 B:16-244 [128962]
  Other proteins in same PDB: d2bq6a1
  automatically matched to d1c5md_
  complexed with ca, iib
Domain(s) for 2gd4:
1. Domain d2gd4b1: 2gd4 B:16-249 [145192]
  Other proteins in same PDB: d2gd4a1, d2gd4c1, d2gd4i1, d2gd4l1
  complexed with ca, nag, nto
2. Domain d2gd4h1: 2gd4 H:16-244 [145194]
  Other proteins in same PDB: d2gd4a1, d2gd4c1, d2gd4i1, d2gd4l1
  automatically matched to 2GD4 B:16-249
  complexed with ca, nag, nto
Domain(s) for 2p3f:
- Domain d2p3fh1: 2p3f H:16-245 [149175]
  Other proteins in same PDB: d2p3fl1
  automatically matched to d1c5md_
  complexed with na
Domain(s) for 2phb:
- Domain d2phba_: 2phb A: [149464]
  Other proteins in same PDB: d2phbb_
  automated match to d1c5md_
  complexed with 230, ca
Domain(s) for 2pr3:
- Domain d2pr3a_: 2pr3 A: [149797]
  Other proteins in same PDB: d2pr3b_
  automated match to d1c5md_
  complexed with 237, ca
Domain(s) for 2ra0:
- Domain d2ra0a_: 2ra0 A: [151810]
  Other proteins in same PDB: d2ra0l_
  automated match to d1c5md_
  complexed with jnj
Domain(s) for 3kl6:
- Domain d3kl6a_: 3kl6 A: [179423]
  Other proteins in same PDB: d3kl6b_
  automated match to d1c5md_
  complexed with 443, ca, edo
Domain(s) for 3liw:
- Domain d3liwa_: 3liw A: [180314]
  Other proteins in same PDB: d3liwb_
  complexed with ca, rup

More info for Species Human (Homo sapiens) [TaxId:9606] from b.47.1.2 Coagulation factor Xa, protease domain

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.47.1.2 Coagulation factor Xa, protease domain:

Species Human (Homo sapiens) [TaxId:9606] from b.47.1.2 Coagulation factor Xa, protease domain first appeared (with stable ids) in SCOP 1.55, called Species Human (Homo sapiens) [TaxId:9606] from b.47.1.2 Coagulation factor Xa (Chrismas factor), protease domain
Species Human (Homo sapiens) [TaxId:9606] from b.47.1.2 Coagulation factor Xa, protease domain appears in SCOP 1.75
Species Human (Homo sapiens) [TaxId:9606] from b.47.1.2 Coagulation factor Xa, protease domain appears in SCOPe 2.02
Species Human (Homo sapiens) [TaxId:9606] from b.47.1.2 Coagulation factor Xa, protease domain appears in the current release, SCOPe 2.08