SCOP 1.73: Protein: Coagulation factor Xa, protease domain

Lineage for Protein: Coagulation factor Xa, protease domain

Root: SCOP 1.73
Class b: All beta proteins [48724] (165 folds)
Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
barrel, closed; n=6, S=8; greek-key
duplication: consists of two domains of the same fold
Superfamily b.47.1: Trypsin-like serine proteases [50494] (4 families)
Family b.47.1.2: Eukaryotic proteases [50514] (47 proteins)
Protein Coagulation factor Xa, protease domain [50574] (2 species)

Species:

Cow (Bos taurus) [TaxId:9913] [50576] (1 PDB entry)
- Domain for 1kig:
  - Domain d1kigh_: 1kig H: [26346]
    Other proteins in same PDB: d1kigi_, d1kigl_
Human (Homo sapiens) [TaxId:9606] [50575] (58 PDB entries)
1. Domain for 1c5m:
  - Domain d1c5md_: 1c5m D: [26338]
    Other proteins in same PDB: d1c5mf_
2. Domain for 1ezq:
  - Domain d1ezqa_: 1ezq A: [26340]
    Other proteins in same PDB: d1ezqb_
    complexed with ca, rpr
3. Domain for 1f0r:
  - Domain d1f0ra_: 1f0r A: [26337]
    Other proteins in same PDB: d1f0rb_
    complexed with 815, ca
4. Domain for 1f0s:
  - Domain d1f0sa_: 1f0s A: [26339]
    Other proteins in same PDB: d1f0sb_
    complexed with ca, pr2
5. Domain for 1fax:
  - Domain d1faxa_: 1fax A: [26345]
    Other proteins in same PDB: d1faxl_
    complexed with ca, dx9; mutant
6. Domain for 1fjs:
  - Domain d1fjsa_: 1fjs A: [26336]
    Other proteins in same PDB: d1fjsl_
    complexed with ca, cl, gol, z34
7. Domain for 1g2l:
  - Domain d1g2la_: 1g2l A: [65112]
    Other proteins in same PDB: d1g2lb_
    complexed with ca, t87
8. Domain for 1g2m:
  - Domain d1g2ma_: 1g2m A: [65114]
    Other proteins in same PDB: d1g2mb_
    complexed with ca, r11
9. Domain for 1hcg:
  - Domain d1hcga_: 1hcg A: [26341]
    Other proteins in same PDB: d1hcgb_
10. Domain for 1ioe:
  - Domain d1ioea_: 1ioe A: [90667]
    Other proteins in same PDB: d1ioel_
    complexed with ca, xma
11. Domain for 1iqe:
  - Domain d1iqea_: 1iqe A: [90670]
    Other proteins in same PDB: d1iqel_
    complexed with ca, xmb
12. Domain for 1iqf:
  - Domain d1iqfa_: 1iqf A: [90672]
    Other proteins in same PDB: d1iqfl_
    complexed with ca, xmd
13. Domain for 1iqg:
  - Domain d1iqga_: 1iqg A: [90674]
    Other proteins in same PDB: d1iqgl_
    complexed with ca, xme
14. Domain for 1iqh:
  - Domain d1iqha_: 1iqh A: [90676]
    Other proteins in same PDB: d1iqhl_
    complexed with ca, xmf
15. Domain for 1iqi:
  - Domain d1iqia_: 1iqi A: [90678]
    Other proteins in same PDB: d1iqil_
    complexed with ca, xmg
16. Domain for 1iqj:
  - Domain d1iqja_: 1iqj A: [90680]
    Other proteins in same PDB: d1iqjl_
    complexed with ca, xmh
17. Domain for 1iqk:
  - Domain d1iqka_: 1iqk A: [90682]
    Other proteins in same PDB: d1iqkl_
    complexed with ca, xmi
18. Domain for 1iql:
  - Domain d1iqla_: 1iql A: [90684]
    Other proteins in same PDB: d1iqll_
    complexed with ca, xmj
19. Domain for 1iqm:
  - Domain d1iqma_: 1iqm A: [90686]
    Other proteins in same PDB: d1iqml_
    complexed with ca, xmk
20. Domain for 1iqn:
  - Domain d1iqna_: 1iqn A: [90688]
    Other proteins in same PDB: d1iqnl_
    complexed with ca, xmc
21. Domain for 1ksn:
  - Domain d1ksna_: 1ksn A: [72924]
    Other proteins in same PDB: d1ksnb_
    complexed with ca, fxv
22. Domain for 1kye:
  - Domain d1kyea_: 1kye A: [77629]
    Other proteins in same PDB: d1kyeb_
    complexed with ca, rup
23. Domain for 1lpg:
  - Domain d1lpgb_: 1lpg B: [84667]
    Other proteins in same PDB: d1lpga_
    complexed with ca, ima
24. Domain for 1lpk:
  - Domain d1lpkb_: 1lpk B: [84669]
    Other proteins in same PDB: d1lpka_
    complexed with ca, cbb
25. Domain for 1lpz:
  - Domain d1lpzb_: 1lpz B: [84671]
    Other proteins in same PDB: d1lpza_
    complexed with ca, cmb
26. Domain for 1lqd:
  - Domain d1lqdb_: 1lqd B: [84677]
    Other proteins in same PDB: d1lqda_
    complexed with ca, cmi
27. Domain for 1mq5:
  - Domain d1mq5a_: 1mq5 A: [79400]
    Other proteins in same PDB: d1mq5l_
    complexed with ca, gol, xlc
28. Domain for 1mq6:
  - Domain d1mq6a_: 1mq6 A: [79402]
    Other proteins in same PDB: d1mq6l_
    complexed with ca, gol, xld
29. Domain for 1nfu:
  - Domain d1nfua_: 1nfu A: [80467]
    Other proteins in same PDB: d1nfub_
    complexed with ca, rrp
30. Domain for 1nfw:
  - Domain d1nfwa_: 1nfw A: [80469]
    Other proteins in same PDB: d1nfwb_
    complexed with ca, rrr
31. Domain for 1nfx:
  - Domain d1nfxa_: 1nfx A: [80471]
    Other proteins in same PDB: d1nfxb_
    complexed with ca, rdr
32. Domain for 1nfy:
  - Domain d1nfya_: 1nfy A: [80473]
    Other proteins in same PDB: d1nfyb_
    complexed with ca, rtr
33. Domain for 1p0s:
  - Domain d1p0sh_: 1p0s H: [93873]
    Other proteins in same PDB: d1p0se_, d1p0sl1, d1p0sl2
    complexed with mg, na; mutant
34. Domain for 1v3x:
  - Domain d1v3xa_: 1v3x A: [113506]
    Other proteins in same PDB: d1v3xb_
    complexed with ca, d76
35. Domain for 1wu1:
  - Domain d1wu1a1: 1wu1 A:16-243 [121270]
    Other proteins in same PDB: d1wu1b1
    automatically matched to d1c5md_
    complexed with ca, d91
36. Domain for 1xka:
  - Domain d1xkac_: 1xka C: [26344]
    Other proteins in same PDB: d1xkal1, d1xkal2
    complexed with 4pp, ca, doh
37. Domains for 1xkb:
  1. Domain d1xkbc_: 1xkb C: [26342]
    Other proteins in same PDB: d1xkba1, d1xkba2, d1xkbb1, d1xkbb2
  2. Domain d1xkbd_: 1xkb D: [26343]
    Other proteins in same PDB: d1xkba1, d1xkba2, d1xkbb1, d1xkbb2
    complexed with 4pp, ca, doh
38. Domain for 1z6e:
  - Domain d1z6ea1: 1z6e A:16-244 [124518]
    Other proteins in same PDB: d1z6eb1
    automatically matched to d1c5md_
    complexed with ik8
39. Domain for 2bmg:
  - Domain d2bmgb1: 2bmg B:16-244 [128796]
    Other proteins in same PDB: d2bmga1
    automatically matched to d1c5md_
    complexed with ca, i1h
40. Domain for 2boh:
  - Domain d2bohb1: 2boh B:16-245 [128911]
    Other proteins in same PDB: d2boha1
    automatically matched to d1c5md_
    complexed with ca, iia
41. Domain for 2bok:
  - Domain d2boka1: 2bok A:16-244 [128916]
    Other proteins in same PDB: d2bokl1
    automatically matched to d1c5md_
    complexed with 784, na; mutant
42. Domain for 2bq6:
  - Domain d2bq6b1: 2bq6 B:16-244 [128962]
    Other proteins in same PDB: d2bq6a1
    automatically matched to d1c5md_
    complexed with ca, iib
43. Domain for 2bq7:
  - Domain d2bq7b1: 2bq7 B:16-244 [128964]
    Other proteins in same PDB: d2bq7a1
    automatically matched to d1c5md_
    complexed with ca, iid
44. Domain for 2bqw:
  - Domain d2bqwb1: 2bqw B:16-244 [128972]
    Other proteins in same PDB: d2bqwa1
    automatically matched to d1c5md_
    complexed with ca, iie
45. Domain for 2cji:
  - Domain d2cjia1: 2cji A:16-244 [130538]
    Other proteins in same PDB: d2cjib1
    automatically matched to d1c5md_
    complexed with ca, gsk
46. Domain for 2d1j:
  - Domain d2d1ja1: 2d1j A:16-243 [131127]
    Other proteins in same PDB: d2d1jb1
    automatically matched to d1c5md_
    complexed with ca, d01
47. Domain for 2fzz:
  - Domain d2fzza1: 2fzz A:16-244 [134486]
    Other proteins in same PDB: d2fzzl1
    automatically matched to d1c5md_
    complexed with 5qc
48. Domain for 2g00:
  - Domain d2g00a1: 2g00 A:16-244 [134488]
    Other proteins in same PDB: d2g00l1
    automatically matched to d1c5md_
    complexed with 4qc
49. Domain for 2h9e:
  - Domain d2h9eh1: 2h9e H:16-243 [136255]
    Other proteins in same PDB: d2h9ec1, d2h9el1
    automatically matched to d1c5md_
    complexed with act, lpd, na, po4
50. Domain for 2j2u:
  - Domain d2j2ua1: 2j2u A:16-243 [137972]
    Other proteins in same PDB: d2j2ub1
    automatically matched to d1c5md_
    complexed with gsq
51. Domain for 2j34:
  - Domain d2j34a1: 2j34 A:16-244 [137976]
    Other proteins in same PDB: d2j34b1
    automatically matched to d1c5md_
    complexed with ca, gs6
52. Domain for 2j38:
  - Domain d2j38a1: 2j38 A:16-244 [137979]
    Other proteins in same PDB: d2j38b1
    automatically matched to d1c5md_
    complexed with ca, gs5
53. Domain for 2j4i:
  - Domain d2j4ia1: 2j4i A:16-244 [138003]
    Other proteins in same PDB: d2j4ib1
    automatically matched to d1c5md_
    complexed with ca, gsj
54. Domain for 2j94:
  - Domain d2j94a1: 2j94 A:16-244 [138145]
    Other proteins in same PDB: d2j94b1
    automatically matched to d1c5md_
    complexed with ca, g15
55. Domain for 2j95:
  - Domain d2j95a1: 2j95 A:16-244 [138147]
    Other proteins in same PDB: d2j95b1
    automatically matched to d1c5md_
    complexed with ca, gsx
56. Domain for 2uwl:
  - Domain d2uwla1: 2uwl A:16-244 [139990]
    Other proteins in same PDB: d2uwlb1
    automatically matched to d1c5md_
    complexed with 895
57. Domain for 2uwo:
  - Domain d2uwoa1: 2uwo A:16-244 [139998]
    Other proteins in same PDB: d2uwob1
    automatically matched to d1c5md_
    complexed with 701
58. Domain for 2uwp:
  - Domain d2uwpa1: 2uwp A:16-245 [140000]
    Other proteins in same PDB: d2uwpb1
    automatically matched to d1c5md_
    complexed with 894, ca, mg

More info for Protein Coagulation factor Xa, protease domain from b.47.1.2: Eukaryotic proteases

Timeline for Protein Coagulation factor Xa, protease domain from b.47.1.2: Eukaryotic proteases:

Protein Coagulation factor Xa, protease domain from b.47.1.2: Eukaryotic proteases first appeared (with stable ids) in SCOP 1.55, called Protein Coagulation factor Xa (Chrismas factor), protease domain from b.47.1.2: Eukaryotic proteases
Protein Coagulation factor Xa, protease domain from b.47.1.2: Eukaryotic proteases appears in SCOP 1.71
Protein Coagulation factor Xa, protease domain from b.47.1.2: Eukaryotic proteases appears in SCOP 1.75
Protein Coagulation factor Xa, protease domain from b.47.1.2: Eukaryotic proteases appears in the current release, SCOPe 2.08