SCOPe 2.08: Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
barrel, closed; n=6, S=8; greek-key
duplication: consists of two domains of the same fold
Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)
Family b.47.1.2: Eukaryotic proteases [50514] (49 proteins)
Protein Trypsin(ogen) [50515] (9 species)
Species Norway rat (Rattus norvegicus) [TaxId:10116] [50518] (37 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

Domain(s) for 1amh:
1. Domain d1amha_: 1amh A: [25994]
  complexed with ca; mutant
2. Domain d1amhb_: 1amh B: [25995]
  complexed with ca; mutant
Domain(s) for 1anb:
- Domain d1anba_: 1anb A: [25998]
  complexed with ben, ca; mutant
Domain(s) for 1anc:
- Domain d1anca_: 1anc A: [25982]
  complexed with ben, ca; mutant
Domain(s) for 1and:
- Domain d1anda_: 1and A: [25985]
  complexed with ben, cu; mutant
Domain(s) for 1ane:
- Domain d1anea_: 1ane A: [25984]
  complexed with ben
Domain(s) for 1bra:
- Domain d1braa_: 1bra A: [25980]
  complexed with ben, ca
Domain(s) for 1brb:
- Domain d1brbe_: 1brb E: [25983]
  Other proteins in same PDB: d1brbi_
Domain(s) for 1brc:
- Domain d1brce_: 1brc E: [25993]
  Other proteins in same PDB: d1brci_
Domain(s) for 1co7:
- Domain d1co7e_: 1co7 E: [76135]
  Other proteins in same PDB: d1co7i_
  complexed with ca; mutant
Domain(s) for 1dpo:
- Domain d1dpoa_: 1dpo A: [25975]
  complexed with ben, ca, so4
Domain(s) for 1ezs:
1. Domain d1ezsc_: 1ezs C: [25989]
  Other proteins in same PDB: d1ezsa_, d1ezsb_
  complexed with ca; mutant
2. Domain d1ezsd_: 1ezs D: [25990]
  Other proteins in same PDB: d1ezsa_, d1ezsb_
  complexed with ca; mutant
Domain(s) for 1ezu:
1. Domain d1ezuc_: 1ezu C: [25996]
  Other proteins in same PDB: d1ezua_, d1ezub_
  complexed with ca
2. Domain d1ezud_: 1ezu D: [25997]
  Other proteins in same PDB: d1ezua_, d1ezub_
  complexed with ca
Domain(s) for 1f5r:
- Domain d1f5ra_: 1f5r A: [59654]
  Other proteins in same PDB: d1f5ri_
  complexed with ca; mutant
Domain(s) for 1f7z:
- Domain d1f7za_: 1f7z A: [59681]
  Other proteins in same PDB: d1f7zi_
  complexed with ca, so4
Domain(s) for 1fy8:
- Domain d1fy8e_: 1fy8 E: [25978]
  Other proteins in same PDB: d1fy8i_
  complexed with ca, so4
Domain(s) for 1i99:
- Domain d1i99e_: 1i99 E: [302508]
  Other proteins in same PDB: d1i99i_
  automated match to d1k9oe_
Domain(s) for 1j14:
- Domain d1j14a_: 1j14 A: [77052]
  complexed with ben, ca, so4; mutant
Domain(s) for 1j15:
- Domain d1j15a_: 1j15 A: [77053]
  complexed with ben, ca, so4; mutant
Domain(s) for 1j16:
- Domain d1j16a_: 1j16 A: [77054]
  complexed with ben, ca, so4; mutant
Domain(s) for 1j17:
- Domain d1j17t_: 1j17 T: [77055]
  complexed with ca, so4, zen; mutant
Domain(s) for 1k9o:
- Domain d1k9oe_: 1k9o E: [68355]
  Other proteins in same PDB: d1k9oi_
  Michaelis serpin-trypsin complex
Domain(s) for 1ql9:
- Domain d1ql9a_: 1ql9 A: [25986]
  complexed with ca, so4, zen; mutant
Domain(s) for 1slu:
- Domain d1slub_: 1slu B: [25977]
  Other proteins in same PDB: d1slua_
  complexed with act, ca
Domain(s) for 1slv:
- Domain d1slvb_: 1slv B: [25991]
  Other proteins in same PDB: d1slva_
  complexed with act, ca, cu
Domain(s) for 1slw:
- Domain d1slwb_: 1slw B: [25979]
  Other proteins in same PDB: d1slwa_
  complexed with act, ca, ni
Domain(s) for 1slx:
- Domain d1slxb_: 1slx B: [25981]
  Other proteins in same PDB: d1slxa_
  complexed with act, ca, zn
Domain(s) for 1trm:
1. Domain d1trma_: 1trm A: [25987]
  complexed with ben, ca; mutant
2. Domain d1trmb_: 1trm B: [25988]
  complexed with ben, ca; mutant
Domain(s) for 1ykt:
- Domain d1ykta_: 1ykt A: [123563]
  Other proteins in same PDB: d1yktb_
  automated match to d1anb__
  complexed with ca, so4; mutant
Domain(s) for 1ylc:
- Domain d1ylca_: 1ylc A: [123645]
  Other proteins in same PDB: d1ylcb1
  automated match to d1anb__
  complexed with ca, so4; mutant
Domain(s) for 1yld:
- Domain d1ylda_: 1yld A: [123646]
  Other proteins in same PDB: d1yldb1
  automated match to d1anb__
  complexed with ca, so4; mutant
Domain(s) for 2trm:
- Domain d2trma_: 2trm A: [25999]
  Michaelis serpin-trypsin complex
  complexed with ben, ca; mutant
Domain(s) for 3fp6:
- Domain d3fp6e_: 3fp6 E: [175950]
  Other proteins in same PDB: d3fp6i_
  automated match to d1amha_
  complexed with ca, edo, pg4, so4
Domain(s) for 3fp7:
- Domain d3fp7e_: 3fp7 E: [175952]
  automated match to d1anea_
  complexed with ca, edo, pg4, so4
Domain(s) for 3fp8:
- Domain d3fp8e_: 3fp8 E: [175953]
  Other proteins in same PDB: d3fp8i_
  automated match to d1anea_
  complexed with ca, edo, pg4, so4
Domain(s) for 3tgi:
- Domain d3tgie_: 3tgi E: [25976]
  Other proteins in same PDB: d3tgii_
  complexed with ca, so4
Domain(s) for 3tgj:
- Domain d3tgje_: 3tgj E: [25992]
  Other proteins in same PDB: d3tgji_
  complexed with ca, so4
Domain(s) for 3tgk:
- Domain d3tgke_: 3tgk E: [63338]
  Other proteins in same PDB: d3tgki_
  complexed with ca, so4; mutant

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.47.1.2 Trypsin(ogen)

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.47.1.2 Trypsin(ogen):

Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.47.1.2 Trypsin(ogen) first appeared (with stable ids) in SCOP 1.55, called Species Rat (Rattus norvegicus) [TaxId:10116] from b.47.1.2 Trypsin(ogen)
Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.47.1.2 Trypsin(ogen) appears in SCOPe 2.07