Lineage for Protein: Trypsin(ogen)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2387558Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2387559Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2387819Family b.47.1.2: Eukaryotic proteases [50514] (49 proteins)
  6. 2388843Protein Trypsin(ogen) [50515] (9 species)

Species:

  1. 2388844Atlantic salmon (Salmo salar) [TaxId:8030] [50520] (11 PDB entries)
    1. Domains for 1a0j:
      1. 2388849Domain d1a0ja_: 1a0j A: [26002]
        complexed with ben, ca, so4
      2. 2388850Domain d1a0jb_: 1a0j B: [26003]
        complexed with ben, ca, so4
      3. 2388851Domain d1a0jc_: 1a0j C: [26004]
        complexed with ben, ca, so4
      4. 2388852Domain d1a0jd_: 1a0j D: [26005]
        complexed with ben, ca, so4
    2. Domain for 1bit:
    3. Domain for 1bzx:
    4. Domain for 1hj8:
    5. Domain for 1utj:
    6. Domain for 1utk:
    7. Domain for 1utl:
    8. Domain for 1utm:
    9. Domain for 2sta:
    10. Domain for 2stb:
    11. Domain for 2tbs:
  2. 2388859Chum salmon (Oncorhynchus keta) [TaxId:8018] [82121] (1 PDB entry)
  3. 2388861Cow (Bos taurus) [TaxId:9913] [50516] (445 PDB entries)
    Uniprot P00760
    1. Domain for 5lgo:
    2. Domain for 5lh4:
    3. Domain for 5lh8:
    4. Domain for 5mn1:
    5. Domain for 5mna:
    6. Domain for 5mnb:
    7. Domain for 5mnc:
    8. Domain for 5mne:
    9. Domain for 5mnf:
    10. Domain for 5mng:
    11. Domain for 5mnh:
    12. Domain for 5mnk:
    13. Domain for 5mnl:
    14. Domain for 5mnm:
    15. Domain for 5mnn:
    16. Domain for 5mno:
    17. Domain for 5mnp:
    18. Domain for 5mnq:
    19. Domain for 5mnx:
    20. Domain for 5mny:
    21. Domain for 5mnz:
    22. Domain for 5mo0:
    23. Domain for 5mo1:
    24. Domain for 5mo2:
    25. Domain for 5mon:
    26. Domain for 5moo:
    27. Domain for 5mop:
    28. Domain for 5moq:
    29. Domain for 5mor:
    30. Domain for 5mos:
    31. Domain for 5ptp:
    32. Domain for 5t3h:
    33. Domain for 6avl:
    34. Domain for 6b6n:
    35. Domain for 6b6o:
    36. Domain for 6b6p:
    37. Domain for 6b6q:
    38. Domain for 6b6r:
    39. Domain for 6b6s:
    40. Domain for 6b6t:
    41. Domain for 6bfp:
    42. Domains for 6dwf:
      1. 3063042Domain d6dwfe_: 6dwf E: [363104]
        automated match to d1j8aa_
        mutant
      2. 3063049Domain d6dwfd_: 6dwf D: [363111]
        automated match to d1j8aa_
        mutant
      3. 3063073Domain d6dwfb_: 6dwf B: [363135]
        automated match to d1j8aa_
        mutant
      4. 3063083Domain d6dwfa_: 6dwf A: [363145]
        automated match to d1j8aa_
        mutant
      5. 3063132Domain d6dwfc_: 6dwf C: [363194]
        automated match to d1j8aa_
        mutant
      6. 3063137Domain d6dwff_: 6dwf F: [363199]
        automated match to d1j8aa_
        mutant
    43. Domains for 6dwh:
      1. 3063022Domain d6dwhd_: 6dwh D: [363084]
        automated match to d1j8aa_
        complexed with cl, na
      2. 3063026Domain d6dwhf_: 6dwh F: [363088]
        automated match to d1j8aa_
        complexed with cl, na
      3. 3063101Domain d6dwhb_: 6dwh B: [363163]
        automated match to d1j8aa_
        complexed with cl, na
      4. 3063139Domain d6dwhc_: 6dwh C: [363201]
        automated match to d1j8aa_
        complexed with cl, na
      5. 3063156Domain d6dwhe_: 6dwh E: [363218]
        automated match to d1j8aa_
        complexed with cl, na
      6. 3063235Domain d6dwha_: 6dwh A: [363297]
        automated match to d1j8aa_
        complexed with cl, na
    44. Domain for 6dzf:
    45. Domain for 6fid:
  4. 2389299Fungus (Fusarium oxysporum) [TaxId:5507] [50521] (16 PDB entries)
    1. Domain for 1fn8:
    2. Domain for 1fy4:
    3. Domain for 1fy5:
    4. Domain for 1gdn:
    5. Domain for 1gdq:
    6. Domain for 1gdu:
    7. Domain for 1ppz:
    8. Domain for 1pq5:
    9. Domain for 1pq7:
    10. Domain for 1pq8:
    11. Domain for 1pqa:
    12. Domain for 1try:
    13. Domain for 1xvm:
    14. Domain for 1xvo:
    15. Domain for 2g51:
    16. Domain for 2g52:
  5. 2389316Human (Homo sapiens) [TaxId:9606] [50519] (4 PDB entries)
    1. Domains for 1trn:
      1. 2389321Domain d1trna_: 1trn A: [26000]
        complexed with isp
      2. 2389322Domain d1trnb_: 1trn B: [26001]
        complexed with isp
    2. Domains for 2ra3:
      1. 2389317Domain d2ra3a_: 2ra3 A: [161546]
        Other proteins in same PDB: d2ra3c_, d2ra3i_
        automated match to d1trna_
        complexed with ca, so4
      2. 2389318Domain d2ra3b_: 2ra3 B: [161547]
        Other proteins in same PDB: d2ra3c_, d2ra3i_
        automated match to d1trna_
        complexed with ca, so4
    3. Domains for 4wwy:
      1. 2389319Domain d4wwya_: 4wwy A: [275295]
        Other proteins in same PDB: d4wwyc_, d4wwyi_
        automated match to d2ra3a_
        complexed with ca, so4; mutant
      2. 2389320Domain d4wwyb_: 4wwy B: [275294]
        Other proteins in same PDB: d4wwyc_, d4wwyi_
        automated match to d2ra3a_
        complexed with ca, so4; mutant
    4. Domains for 4wxv:
      1. 2389323Domain d4wxva_: 4wxv A: [275298]
        Other proteins in same PDB: d4wxvc_, d4wxvi_
        automated match to d2ra3a_
        complexed with ca, so4; mutant
      2. 2389324Domain d4wxvb_: 4wxv B: [275299]
        Other proteins in same PDB: d4wxvc_, d4wxvi_
        automated match to d2ra3a_
        complexed with ca, so4; mutant
  6. 2389325Human (Homo sapiens), trypsin IV (brain isoform) [TaxId:9606] [69283] (15 PDB entries)
    1. Domain for 1h4w:
    2. Domains for 2r9p:
      1. 2389327Domain d2r9pa_: 2r9p A: [161541]
        Other proteins in same PDB: d2r9pe_, d2r9pf_, d2r9pg_, d2r9pi_
        automated match to d1h4wa_
        complexed with so4
      2. 2389328Domain d2r9pb_: 2r9p B: [161542]
        Other proteins in same PDB: d2r9pe_, d2r9pf_, d2r9pg_, d2r9pi_
        automated match to d1h4wa_
        complexed with so4
      3. 2389329Domain d2r9pc_: 2r9p C: [161543]
        Other proteins in same PDB: d2r9pe_, d2r9pf_, d2r9pg_, d2r9pi_
        automated match to d1h4wa_
        complexed with so4
      4. 2389330Domain d2r9pd_: 2r9p D: [161544]
        Other proteins in same PDB: d2r9pe_, d2r9pf_, d2r9pg_, d2r9pi_
        automated match to d1h4wa_
        complexed with so4
    3. Domains for 3l33:
      1. 2389346Domain d3l33a_: 3l33 A: [179892]
        Other proteins in same PDB: d3l33e_, d3l33f_, d3l33g_, d3l33h_
        automated match to d1h4wa_
        complexed with ca, fmt
      2. 2389347Domain d3l33b_: 3l33 B: [179893]
        Other proteins in same PDB: d3l33e_, d3l33f_, d3l33g_, d3l33h_
        automated match to d1h4wa_
        complexed with ca, fmt
      3. 2389348Domain d3l33c_: 3l33 C: [179894]
        Other proteins in same PDB: d3l33e_, d3l33f_, d3l33g_, d3l33h_
        automated match to d1h4wa_
        complexed with ca, fmt
      4. 2389349Domain d3l33d_: 3l33 D: [179895]
        Other proteins in same PDB: d3l33e_, d3l33f_, d3l33g_, d3l33h_
        automated match to d1h4wa_
        complexed with ca, fmt
    4. Domains for 3l3t:
      1. 2389340Domain d3l3ta_: 3l3t A: [179915]
        Other proteins in same PDB: d3l3te_, d3l3tf_, d3l3tg_, d3l3th_
        automated match to d1h4wa_
        complexed with ca, fmt
      2. 2389341Domain d3l3tb_: 3l3t B: [179916]
        Other proteins in same PDB: d3l3te_, d3l3tf_, d3l3tg_, d3l3th_
        automated match to d1h4wa_
        complexed with ca, fmt
      3. 2389342Domain d3l3tc_: 3l3t C: [179917]
        Other proteins in same PDB: d3l3te_, d3l3tf_, d3l3tg_, d3l3th_
        automated match to d1h4wa_
        complexed with ca, fmt
      4. 2389343Domain d3l3td_: 3l3t D: [179918]
        Other proteins in same PDB: d3l3te_, d3l3tf_, d3l3tg_, d3l3th_
        automated match to d1h4wa_
        complexed with ca, fmt
    5. Domain for 3p92:
    6. Domain for 3p95:
    7. Domains for 4dg4:
      1. 2389332Domain d4dg4a_: 4dg4 A: [201694]
        Other proteins in same PDB: d4dg4c_, d4dg4e_, d4dg4f_, d4dg4h_
        automated match to d4dg4b_
        complexed with ca, so4
      2. 2389333Domain d4dg4b_: 4dg4 B: [193528]
        Other proteins in same PDB: d4dg4c_, d4dg4e_, d4dg4f_, d4dg4h_
        automated match to d3p95a_
        complexed with ca, so4
      3. 2389334Domain d4dg4d_: 4dg4 D: [201695]
        Other proteins in same PDB: d4dg4c_, d4dg4e_, d4dg4f_, d4dg4h_
        automated match to d4dg4b_
        complexed with ca, so4
      4. 2389335Domain d4dg4g_: 4dg4 G: [201696]
        Other proteins in same PDB: d4dg4c_, d4dg4e_, d4dg4f_, d4dg4h_
        automated match to d4dg4b_
        complexed with ca, so4
    8. Domains for 4u30:
      1. 2389350Domain d4u30a_: 4u30 A: [261614]
        Other proteins in same PDB: d4u30w_, d4u30x_, d4u30y_, d4u30z_
        automated match to d3p95a_
        complexed with ca
      2. 2389351Domain d4u30b_: 4u30 B: [261615]
        Other proteins in same PDB: d4u30w_, d4u30x_, d4u30y_, d4u30z_
        automated match to d3p95a_
        complexed with ca
      3. 2389352Domain d4u30c_: 4u30 C: [260983]
        Other proteins in same PDB: d4u30w_, d4u30x_, d4u30y_, d4u30z_
        automated match to d3p95a_
        complexed with ca
      4. 2389353Domain d4u30d_: 4u30 D: [300896]
        Other proteins in same PDB: d4u30w_, d4u30x_, d4u30y_, d4u30z_
        automated match to d3p95a_
        complexed with ca
    9. Domain for 4u32:
    10. Domains for 5c67:
      1. 2389344Domain d5c67a_: 5c67 A: [316884]
        Other proteins in same PDB: d5c67c1, d5c67c2, d5c67e1, d5c67e2
        automated match to d3p95a_
      2. 2389345Domain d5c67b_: 5c67 B: [316876]
        Other proteins in same PDB: d5c67c1, d5c67c2, d5c67e1, d5c67e2
        automated match to d3p95a_
    11. Domain for 5jbt:
    12. Domain for 5tp0:
    13. Domains for 6bx8:
      1. 3064298Domain d6bx8c_: 6bx8 C: [364360]
        Other proteins in same PDB: d6bx8b_, d6bx8d_, d6bx8f_, d6bx8h_
        automated match to d3p95a_
        complexed with so4
      2. 3064303Domain d6bx8e_: 6bx8 E: [364365]
        Other proteins in same PDB: d6bx8b_, d6bx8d_, d6bx8f_, d6bx8h_
        automated match to d3p95a_
        complexed with so4
      3. 3064307Domain d6bx8a_: 6bx8 A: [364369]
        Other proteins in same PDB: d6bx8b_, d6bx8d_, d6bx8f_, d6bx8h_
        automated match to d3p95a_
        complexed with so4
      4. 3064323Domain d6bx8g_: 6bx8 G: [364385]
        Other proteins in same PDB: d6bx8b_, d6bx8d_, d6bx8f_, d6bx8h_
        automated match to d3p95a_
        complexed with so4
    14. Domains for 6gfi:
      1. 3057450Domain d6gfib_: 6gfi B: [357512]
        Other proteins in same PDB: d6gfic1, d6gfic2, d6gfie1, d6gfie2
        automated match to d3p95a_
        complexed with edo
      2. 3057490Domain d6gfia_: 6gfi A: [357552]
        Other proteins in same PDB: d6gfic1, d6gfic2, d6gfie1, d6gfie2
        automated match to d3p95a_
        complexed with edo
    15. Domain for 6har:
  7. 2389354Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId:6717] [141385] (2 PDB entries)
    Uniprot Q52V24 1-237
    1. Domain for 2f91:
    2. Domains for 4bnr:
      1. 2389356Domain d4bnra_: 4bnr A: [227679]
        Other proteins in same PDB: d4bnri_, d4bnrj_
        automated match to d2f91a1
        complexed with ca, so4
      2. 2389357Domain d4bnrb_: 4bnr B: [227680]
        Other proteins in same PDB: d4bnri_, d4bnrj_
        automated match to d2f91a1
        complexed with ca, so4
  8. 2389358Norway rat (Rattus norvegicus) [TaxId:10116] [50518] (37 PDB entries)
    1. Domains for 1amh:
      1. 2389388Domain d1amha_: 1amh A: [25994]
        complexed with ca; mutant
      2. 2389389Domain d1amhb_: 1amh B: [25995]
        complexed with ca; mutant
    2. Domain for 1anb:
    3. Domain for 1anc:
    4. Domain for 1and:
    5. Domain for 1ane:
    6. Domain for 1bra:
    7. Domain for 1brb:
    8. Domain for 1brc:
    9. Domain for 1co7:
    10. Domain for 1dpo:
    11. Domains for 1ezs:
      1. 2389383Domain d1ezsc_: 1ezs C: [25989]
        Other proteins in same PDB: d1ezsa_, d1ezsb_
        complexed with ca; mutant
      2. 2389384Domain d1ezsd_: 1ezs D: [25990]
        Other proteins in same PDB: d1ezsa_, d1ezsb_
        complexed with ca; mutant
    12. Domains for 1ezu:
      1. 2389390Domain d1ezuc_: 1ezu C: [25996]
        Other proteins in same PDB: d1ezua_, d1ezub_
        complexed with ca
      2. 2389391Domain d1ezud_: 1ezu D: [25997]
        Other proteins in same PDB: d1ezua_, d1ezub_
        complexed with ca
    13. Domain for 1f5r:
    14. Domain for 1f7z:
    15. Domain for 1fy8:
    16. Domain for 1i99:
    17. Domain for 1j14:
    18. Domain for 1j15:
    19. Domain for 1j16:
    20. Domain for 1j17:
    21. Domain for 1k9o:
    22. Domain for 1ql9:
    23. Domain for 1slu:
    24. Domain for 1slv:
    25. Domain for 1slw:
    26. Domain for 1slx:
    27. Domains for 1trm:
      1. 2389396Domain d1trma_: 1trm A: [25987]
        complexed with ben, ca; mutant
      2. 2389397Domain d1trmb_: 1trm B: [25988]
        complexed with ben, ca; mutant
    28. Domain for 1ykt:
    29. Domain for 1ylc:
    30. Domain for 1yld:
    31. Domain for 2trm:
      • 2389399Domain d2trma_: 2trm A: [25999]
        Michaelis serpin-trypsin complex
        complexed with ben, ca; mutant
    32. Domain for 3fp6:
    33. Domain for 3fp7:
    34. Domain for 3fp8:
    35. Domain for 3tgi:
    36. Domain for 3tgj:
    37. Domain for 3tgk:
  9. 2389400Pig (Sus scrofa) [TaxId:9823] [50517] (34 PDB entries)
    Uniprot P00761 9-231 ! Uniprot P00761
    1. Domain for 1aks:
    2. Domain for 1an1:
    3. Domain for 1avw:
    4. Domain for 1avx:
    5. Domain for 1c9p:
    6. Domain for 1eja:
    7. Domain for 1ept:
    8. Domain for 1fmg:
    9. Domain for 1fn6:
    10. Domain for 1fni:
    11. Domain for 1h9h:
    12. Domain for 1h9i:
    13. Domain for 1ldt:
    14. Domain for 1mct:
    15. Domain for 1pph:
    16. Domain for 1qqu:
    17. Domain for 1r0t:
    18. Domain for 1s5s:
    19. Domain for 1s6f:
    20. Domain for 1s6h:
    21. Domain for 1s81:
    22. Domain for 1s82:
    23. Domain for 1s83:
    24. Domain for 1s84:
    25. Domain for 1s85:
    26. Domains for 1tfx:
      1. 2389428Domain d1tfxa_: 1tfx A: [25972]
        Other proteins in same PDB: d1tfxc_, d1tfxd_
        complexed with ca
      2. 2389429Domain d1tfxb_: 1tfx B: [25973]
        Other proteins in same PDB: d1tfxc_, d1tfxd_
        complexed with ca
    27. Domains for 1tx6:
      1. 2389424Domain d1tx6a_: 1tx6 A: [119375]
        Other proteins in same PDB: d1tx6i1, d1tx6i2, d1tx6j1, d1tx6j2
        automated match to d1an1e_
        complexed with ca
      2. 2389425Domain d1tx6b_: 1tx6 B: [119376]
        Other proteins in same PDB: d1tx6i1, d1tx6i2, d1tx6j1, d1tx6j2
        automated match to d1an1e_
        complexed with ca
      3. 2389426Domain d1tx6c_: 1tx6 C: [119377]
        Other proteins in same PDB: d1tx6i1, d1tx6i2, d1tx6j1, d1tx6j2
        automated match to d1an1e_
        complexed with ca
      4. 2389427Domain d1tx6d_: 1tx6 D: [119378]
        Other proteins in same PDB: d1tx6i1, d1tx6i2, d1tx6j1, d1tx6j2
        automated match to d1an1e_
        complexed with ca
    28. Domain for 1uhb:
      • 2389434Domain d1uhb.1: 1uhb A:,B: [107845]
        complexed with an auto catalyticaly produced native peptide from trypsin, chain P (Uniprot P00761 177-185)
        complexed with act, ca
    29. Domain for 1v6d:
    30. Domain for 1yf4:
    31. Domain for 1z7k:
    32. Domain for 2a31:
    33. Domain for 2a32:
    34. Domains for 3myw:
      1. 2389436Domain d3mywa_: 3myw A: [181717]
        Other proteins in same PDB: d3mywi_
        automated match to d1avwa_
        complexed with ca
      2. 2389437Domain d3mywb_: 3myw B: [191793]
        Other proteins in same PDB: d3mywi_
        automated match to d3mywa_
        complexed with ca

More pages of results:

More info for Protein Trypsin(ogen) from b.47.1.2: Eukaryotic proteases

Timeline for Protein Trypsin(ogen) from b.47.1.2: Eukaryotic proteases: