SCOPe 2.07: Protein: alpha-Lytic protease

Lineage for Protein: alpha-Lytic protease

Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds)
Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
barrel, closed; n=6, S=8; greek-key
duplication: consists of two domains of the same fold
Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)
Family b.47.1.1: Prokaryotic proteases [50495] (16 proteins)
Protein alpha-Lytic protease [50498] (1 species)

Species:

Lysobacter enzymogenes, 495 [TaxId:69] [50499] (46 PDB entries)
1. Domain for 1boq:
  - Domain d1boqa_: 1boq A: [25797]
    complexed with so4
2. Domain for 1gba:
  - Domain d1gbaa_: 1gba A: [25783]
    complexed with so4
3. Domain for 1gbb:
  - Domain d1gbba_: 1gbb A: [25785]
    complexed with so4
4. Domain for 1gbc:
  - Domain d1gbca_: 1gbc A: [25788]
    complexed with so4
5. Domain for 1gbd:
  - Domain d1gbda_: 1gbd A: [25787]
    complexed with so4
6. Domain for 1gbe:
  - Domain d1gbea_: 1gbe A: [25803]
    complexed with so4
7. Domain for 1gbf:
  - Domain d1gbfa_: 1gbf A: [25784]
    complexed with so4
8. Domain for 1gbh:
  - Domain d1gbha_: 1gbh A: [25800]
    complexed with so4
9. Domain for 1gbi:
  - Domain d1gbia_: 1gbi A: [25802]
    complexed with so4
10. Domain for 1gbj:
  - Domain d1gbja_: 1gbj A: [25776]
    complexed with so4
11. Domain for 1gbk:
  - Domain d1gbka_: 1gbk A: [25790]
    complexed with so4
12. Domain for 1gbl:
  - Domain d1gbla_: 1gbl A: [25794]
    complexed with so4
13. Domain for 1gbm:
  - Domain d1gbma_: 1gbm A: [25799]
    complexed with so4
14. Domain for 1p01:
  - Domain d1p01a_: 1p01 A: [25778]
    complexed with 0eg, so4
15. Domain for 1p02:
  - Domain d1p02a_: 1p02 A: [25777]
    complexed with so4
16. Domain for 1p03:
  - Domain d1p03a_: 1p03 A: [25792]
    complexed with so4
17. Domain for 1p04:
  - Domain d1p04a_: 1p04 A: [25805]
    complexed with so4
18. Domain for 1p05:
  - Domain d1p05a_: 1p05 A: [25786]
    complexed with so4
19. Domain for 1p06:
  - Domain d1p06a_: 1p06 A: [25804]
    complexed with so4
20. Domain for 1p09:
  - Domain d1p09a_: 1p09 A: [25793]
    complexed with so4
21. Domain for 1p10:
  - Domain d1p10a_: 1p10 A: [25801]
    complexed with so4
22. Domain for 1p11:
  - Domain d1p11e_: 1p11 E: [25775]
    complexed with so4
23. Domain for 1p12:
  - Domain d1p12e_: 1p12 E: [25774]
    complexed with so4
24. Domain for 1qq4:
  - Domain d1qq4a_: 1qq4 A: [25768]
    complexed with gol, so4; mutant
25. Domain for 1qrw:
  - Domain d1qrwa_: 1qrw A: [25769]
    complexed with gol, so4; mutant
26. Domain for 1qrx:
  - Domain d1qrxa_: 1qrx A: [25771]
    complexed with gol, so4
27. Domain for 1ssx:
  - Domain d1ssxa_: 1ssx A: [98978]
    complexed with gol, so4
28. Domain for 1tal:
  - Domain d1tala_: 1tal A: [25770]
    complexed with so4, tam
29. Domain for 2alp:
  - Domain d2alpa_: 2alp A: [25772]
    complexed with so4
30. Domain for 2h5c:
  - Domain d2h5ca_: 2h5c A: [136145]
    automated match to d1boqa_
    complexed with gol, so4
31. Domain for 2h5d:
  - Domain d2h5da_: 2h5d A: [136146]
    automated match to d1boqa_
    complexed with gol, so4
32. Domain for 2lpr:
  - Domain d2lpra_: 2lpr A: [25798]
    complexed with so4; mutant
33. Domain for 2ull:
  - Domain d2ulla_: 2ull A: [25773]
    complexed with so4, tam
34. Domain for 3lpr:
  - Domain d3lpra_: 3lpr A: [25791]
    complexed with so4; mutant
35. Domains for 3pro:
  1. Domain d3proa_: 3pro A: [25780]
    Other proteins in same PDB: d3proc1, d3proc2, d3prod1, d3prod2
    complexed with aes
  2. Domain d3prob_: 3pro B: [25781]
    Other proteins in same PDB: d3proc1, d3proc2, d3prod1, d3prod2
    complexed with aes
36. Domains for 3qgj:
  1. Domain d3qgja_: 3qgj A: [184377]
    automated match to d1boqa_
    complexed with edo, so4, tfa
  2. Domain d3qgjc_: 3qgj C: [184378]
    automated match to d1boqa_
    complexed with edo, so4, tfa
37. Domain for 3urc:
  - Domain d3urca_: 3urc A: [195306]
    automated match to d2h5ca_
    complexed with gol, so4; mutant
38. Domain for 3urd:
  - Domain d3urda_: 3urd A: [195305]
    automated match to d2h5ca_
    complexed with gol, so4; mutant
39. Domains for 3ure:
  1. Domain d3urea_: 3ure A: [195308]
    automated match to d2h5ca_
    complexed with so4; mutant
  2. Domain d3ureb_: 3ure B: [195307]
    automated match to d2h5ca_
    complexed with so4; mutant
40. Domains for 4pro:
  1. Domain d4proa_: 4pro A: [25806]
    Other proteins in same PDB: d4proc1, d4proc2, d4prod1, d4prod2
  2. Domain d4prob_: 4pro B: [25807]
    Other proteins in same PDB: d4proc1, d4proc2, d4prod1, d4prod2
41. Domain for 5lpr:
  - Domain d5lpra_: 5lpr A: [25789]
    complexed with so4; mutant
42. Domain for 5wot:
  - Domain d5wota_: 5wot A: [348213]
    automated match to d2h5ca_
43. Domain for 6lpr:
  - Domain d6lpra_: 6lpr A: [25779]
    complexed with so4; mutant
44. Domain for 7lpr:
  - Domain d7lpra_: 7lpr A: [25782]
    complexed with so4; mutant
45. Domain for 8lpr:
  - Domain d8lpra_: 8lpr A: [25796]
    complexed with so4; mutant
46. Domain for 9lpr:
  - Domain d9lpra_: 9lpr A: [25795]
    complexed with so4; mutant

More info for Protein alpha-Lytic protease from b.47.1.1: Prokaryotic proteases

Timeline for Protein alpha-Lytic protease from b.47.1.1: Prokaryotic proteases:

Protein alpha-Lytic protease from b.47.1.1: Prokaryotic proteases first appeared (with stable ids) in SCOP 1.55
Protein alpha-Lytic protease from b.47.1.1: Prokaryotic proteases appears in SCOPe 2.06
Protein alpha-Lytic protease from b.47.1.1: Prokaryotic proteases appears in the current release, SCOPe 2.08