Lineage for Protein: Pyridoxine 5'-phoshate oxidase (PNP oxidase)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2794132Fold b.45: Split barrel-like [50474] (3 superfamilies)
    barrel; n=6, S=10; greek-key
  4. 2794133Superfamily b.45.1: FMN-binding split barrel [50475] (5 families) (S)
    related to the ferredoxin reductase-like FAD-binding domain
  5. 2794134Family b.45.1.1: PNP-oxidase like [50476] (17 proteins)
  6. 2794219Protein Pyridoxine 5'-phoshate oxidase (PNP oxidase) [50479] (6 species)
    elaborated with additional secondary structures; active as dimer

Species:

  1. 2794220Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [50480] (1 PDB entry)
    • Domains for 1ci0:
      1. 2794221Domain d1ci0a_: 1ci0 A: [25750]
        complexed with fmn
        has additional insertions and/or extensions that are not grouped together
      2. 2794222Domain d1ci0b_: 1ci0 B: [25751]
        complexed with fmn
        has additional insertions and/or extensions that are not grouped together
  2. 2794223Escherichia coli [TaxId:562] [50481] (7 PDB entries)
    Uniprot P28225
    1. Domain for 1dnl:
      • 2794224Domain d1dnla_: 1dnl A: [25753]
        complexed with fmn, po4
        has additional insertions and/or extensions that are not grouped together
    2. Domain for 1g76:
      • 2794228Domain d1g76a_: 1g76 A: [25755]
        complexed with fmn, plp, po4
        has additional insertions and/or extensions that are not grouped together
    3. Domain for 1g77:
      • 2794227Domain d1g77a_: 1g77 A: [25754]
        complexed with fmn, plp, po4
        has additional insertions and/or extensions that are not grouped together
    4. Domain for 1g78:
      • 2794229Domain d1g78a_: 1g78 A: [25756]
        complexed with fmn, plp, po4
        has additional insertions and/or extensions that are not grouped together
    5. Domain for 1g79:
      • 2794225Domain d1g79a_: 1g79 A: [25752]
        complexed with bme, fmn, plp, po4
        has additional insertions and/or extensions that are not grouped together
    6. Domain for 1jnw:
      • 2794226Domain d1jnwa_: 1jnw A: [63200]
        complexed with fmn, plp, po4
        has additional insertions and/or extensions that are not grouped together
    7. Domains for 1wv4:
      1. 2794230Domain d1wv4a_: 1wv4 A: [114912]
        complexed with fmn, po4
        has additional insertions and/or extensions that are not grouped together
      2. 2794231Domain d1wv4b_: 1wv4 B: [114913]
        complexed with fmn, po4
        has additional insertions and/or extensions that are not grouped together
  3. 2794232Human (Homo sapiens) [TaxId:9606] [82120] (1 PDB entry)
    • Domain for 1nrg:
      • 2794233Domain d1nrga_: 1nrg A: [80694]
        complexed with bme, fmn, plp, po4
        has additional insertions and/or extensions that are not grouped together
  4. 2794234Mycobacterium tuberculosis [TaxId:1773] [141347] (1 PDB entry)
    Uniprot P65682 24-112
  5. 2794237Pseudomonas aeruginosa [TaxId:287] [117226] (1 PDB entry)
    Uniprot Q820A5
    • Domains for 1t9m:
      1. 2794238Domain d1t9ma_: 1t9m A: [112364]
        complexed with acy, fmn, so4
        has additional insertions and/or extensions that are not grouped together
      2. 2794239Domain d1t9mb_: 1t9m B: [112365]
        complexed with acy, fmn, so4
        has additional insertions and/or extensions that are not grouped together
  6. 2794240Pseudomonas fluorescens [TaxId:294] [117227] (5 PDB entries)
    Uniprot Q51793
    1. Domains for 1ty9:
      1. 2794249Domain d1ty9a_: 1ty9 A: [112827]
        complexed with fmn, so4
        has additional insertions and/or extensions that are not grouped together
      2. 2794250Domain d1ty9b_: 1ty9 B: [112828]
        complexed with fmn, so4
        has additional insertions and/or extensions that are not grouped together
    2. Domains for 4hms:
      1. 2794241Domain d4hmsa_: 4hms A: [222677]
        automated match to d1ty9b_
        complexed with fmn, so4

        has additional insertions and/or extensions that are not grouped together
      2. 2794242Domain d4hmsb_: 4hms B: [222678]
        automated match to d1ty9b_
        complexed with fmn, so4

        has additional insertions and/or extensions that are not grouped together
    3. Domains for 4hmt:
      1. 2794243Domain d4hmta_: 4hmt A: [222679]
        automated match to d1ty9b_
        complexed with fmn, nnv, so4

        has additional insertions and/or extensions that are not grouped together
      2. 2794244Domain d4hmtb_: 4hmt B: [222680]
        automated match to d1ty9b_
        complexed with fmn, nnv, so4

        has additional insertions and/or extensions that are not grouped together
    4. Domains for 4hmu:
      1. 2794247Domain d4hmua_: 4hmu A: [222681]
        automated match to d1ty9b_
        complexed with fmn, so4, wub

        has additional insertions and/or extensions that are not grouped together
      2. 2794248Domain d4hmub_: 4hmu B: [222682]
        automated match to d1ty9b_
        complexed with fmn, so4, wub

        has additional insertions and/or extensions that are not grouped together
    5. Domains for 4hmv:
      1. 2794245Domain d4hmva_: 4hmv A: [222683]
        automated match to d1ty9b_
        complexed with fmn, so4, wub

        has additional insertions and/or extensions that are not grouped together
      2. 2794246Domain d4hmvb_: 4hmv B: [222684]
        automated match to d1ty9b_
        complexed with fmn, so4, wub

        has additional insertions and/or extensions that are not grouped together

More info for Protein Pyridoxine 5'-phoshate oxidase (PNP oxidase) from b.45.1.1: PNP-oxidase like

Timeline for Protein Pyridoxine 5'-phoshate oxidase (PNP oxidase) from b.45.1.1: PNP-oxidase like: