SCOPe 2.06: Family b.45.1.1: PNP-oxidase like

Lineage for Family b.45.1.1: PNP-oxidase like

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.45: Split barrel-like [50474] (3 superfamilies)
   barrel; n=6, S=10; greek-key

4. Superfamily b.45.1: FMN-binding split barrel [50475] (5 families)
   related to the ferredoxin reductase-like FAD-binding domain

5. Family b.45.1.1: PNP-oxidase like [50476] (17 proteins)

Proteins:

1. 5-nitroimidazole resistance protein BT3078 [141364] (1 species)

   • Species Bacteroides thetaiotaomicron [TaxId:818] [141365] (1 PDB entry)
     Uniprot Q8A377 1-157

2. Cellular repressor of E1A-stimulated genes CREG1 [141356] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [141357] (1 PDB entry)
     Uniprot O75629 49-218

3. FMN-binding protein [50477] (1 species)

   • Species Desulfovibrio vulgaris, strain Miyazaki F [TaxId:881] [50478] (11 PDB entries)

4. General stress protein 26 [141352] (1 species)

   • Species Nostoc punctiforme pcc 73102 [TaxId:63737] [141353] (1 PDB entry)

5. Hypotheical protein CAC3491 [141360] (1 species)
   related to general stress protein 26(GS26) of B.subtilis

   • Species Clostridium acetobutylicum [TaxId:1488] [141361] (1 PDB entry)
     Uniprot Q97DI6 2-142

6. Hypothetical protein Alr5027 [110234] (1 species)

   • Species Nostoc sp. PCC 7120 [TaxId:103690] [110235] (1 PDB entry)
     Uniprot Q8YMA7

7. Hypothetical protein BH0577 [141348] (1 species)

   • Species Bacillus halodurans [TaxId:86665] [141349] (1 PDB entry)
     Uniprot Q9KFA8 10-165

8. Hypothetical protein Mll6688 [141354] (1 species)
   binds FAD cofactor

   • Species Mesorhizobium loti [TaxId:381] [141355] (1 PDB entry)
     Uniprot Q988L5 1-148

9. Hypothetical protein PA4388 [141350] (1 species)

   • Species Pseudomonas aeruginosa [TaxId:287] [141351] (1 PDB entry)
     Uniprot Q9HW16 2-239

10. Hypothetical protein Rv1155 [117230] (1 species)

    • Species Mycobacterium tuberculosis [TaxId:1773] [117231] (4 PDB entries)
      Uniprot O06553

11. Hypothetical protein Rv2074 [141362] (1 species)

    • Species Mycobacterium tuberculosis [TaxId:1773] [141363] (1 PDB entry)
      Uniprot Q10682 11-135

12. Hypothetical protein Rv2991 [117232] (1 species)

    • Species Mycobacterium tuberculosis [TaxId:1773] [117233] (1 PDB entry)
      Uniprot O53240

13. Hypothetical protein Ta1372 [141366] (1 species)

    • Species Thermoplasma acidophilum [TaxId:2303] [141367] (1 PDB entry)
      Uniprot Q9HIG7 16-208

14. NimA-related protein DR0842 [117228] (1 species)

    • Species Deinococcus radiodurans [TaxId:1299] [117229] (4 PDB entries)
      Uniprot Q9RW27

15. Putative general stress protein BT1439 [141358] (1 species)

    • Species Bacteroides thetaiotaomicron [TaxId:818] [141359] (1 PDB entry)
      Uniprot Q8A7U5 3-137

16. Pyridoxine 5'-phoshate oxidase (PNP oxidase) [50479] (6 species)
    elaborated with additional secondary structures; active as dimer

    1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [50480] (1 PDB entry)

    2. Species Escherichia coli [TaxId:562] [50481] (7 PDB entries)
       Uniprot P28225

    3. Species Human (Homo sapiens) [TaxId:9606] [82120] (1 PDB entry)

    4. Species Mycobacterium tuberculosis [TaxId:1773] [141347] (1 PDB entry)
       Uniprot P65682 24-112

    5. Species Pseudomonas aeruginosa [TaxId:287] [117226] (1 PDB entry)
       Uniprot Q820A5

    6. Species Pseudomonas fluorescens [TaxId:294] [117227] (5 PDB entries)
       Uniprot Q51793

17. automated matches [190383] (6 species)
    not a true protein

    1. Species Bacteroides thetaiotaomicron [TaxId:226186] [187708] (1 PDB entry)

    2. Species Deinococcus radiodurans [TaxId:1299] [187232] (3 PDB entries)

    3. Species Human (Homo sapiens) [TaxId:9606] [188118] (2 PDB entries)

    4. Species Mycobacterium tuberculosis [TaxId:1138877] [269332] (1 PDB entry)

    5. Species Mycobacterium tuberculosis [TaxId:83332] [319533] (1 PDB entry)

    6. Species Pseudomonas aeruginosa, PA01 [TaxId:208964] [187419] (1 PDB entry)

More info for Family b.45.1.1: PNP-oxidase like

Timeline for Family b.45.1.1: PNP-oxidase like:

• Family b.45.1.1: PNP-oxidase like first appeared (with stable ids) in SCOP 1.55
  
• Family b.45.1.1: PNP-oxidase like appears in SCOPe 2.05
  
• Family b.45.1.1: PNP-oxidase like appears in SCOPe 2.07
  
• Family b.45.1.1: PNP-oxidase like appears in the current release, SCOPe 2.08