SCOP 1.75: Protein: Elongation factor Tu (EF-Tu)

Lineage for Protein: Elongation factor Tu (EF-Tu)

Root: SCOP 1.75
Class b: All beta proteins [48724] (174 folds)
Fold b.44: Elongation factor/aminomethyltransferase common domain [50464] (2 superfamilies)
barrel, closed; n=6, S=10; greek-key
Superfamily b.44.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain [50465] (1 family)
probably related to the second domain and its superfamiy by a circular permutation
Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain [50466] (6 proteins)
Protein Elongation factor Tu (EF-Tu) [50467] (4 species)

Species:

Cow (Bos taurus), mitochondrial [TaxId:9913] [50471] (2 PDB entries)
Uniprot P49410 56-452
1. Domains for 1d2e:
  1. Domain d1d2ea2: 1d2e A:349-451 [25741]
    Other proteins in same PDB: d1d2ea1, d1d2ea3, d1d2eb1, d1d2eb3, d1d2ec1, d1d2ec3, d1d2ed1, d1d2ed3
  2. Domain d1d2eb2: 1d2e B:349-451 [25742]
    Other proteins in same PDB: d1d2ea1, d1d2ea3, d1d2eb1, d1d2eb3, d1d2ec1, d1d2ec3, d1d2ed1, d1d2ed3
  3. Domain d1d2ec2: 1d2e C:349-451 [25743]
    Other proteins in same PDB: d1d2ea1, d1d2ea3, d1d2eb1, d1d2eb3, d1d2ec1, d1d2ec3, d1d2ed1, d1d2ed3
  4. Domain d1d2ed2: 1d2e D:349-451 [25744]
    Other proteins in same PDB: d1d2ea1, d1d2ea3, d1d2eb1, d1d2eb3, d1d2ec1, d1d2ec3, d1d2ed1, d1d2ed3
    complexed with gdp, mo2, mo4
2. Domain for 1xb2:
  - Domain d1xb2a2: 1xb2 A:349-452 [115055]
    Other proteins in same PDB: d1xb2a1, d1xb2a3, d1xb2b1, d1xb2b2, d1xb2b3
Escherichia coli [TaxId:562] [50468] (7 PDB entries)
Uniprot P02990
1. Domains for 1d8t:
  1. Domain d1d8ta2: 1d8t A:297-393 [25726]
    Other proteins in same PDB: d1d8ta1, d1d8ta3, d1d8tb1, d1d8tb3
  2. Domain d1d8tb2: 1d8t B:297-393 [25727]
    Other proteins in same PDB: d1d8ta1, d1d8ta3, d1d8tb1, d1d8tb3
    complexed with ace, gdp, gea, mg
2. Domains for 1dg1:
  1. Domain d1dg1g2: 1dg1 G:297-393 [25724]
    Other proteins in same PDB: d1dg1g1, d1dg1g3, d1dg1h1, d1dg1h3
  2. Domain d1dg1h2: 1dg1 H:297-393 [25725]
    Other proteins in same PDB: d1dg1g1, d1dg1g3, d1dg1h1, d1dg1h3
3. Domains for 1efc:
  1. Domain d1efca2: 1efc A:297-393 [25720]
    Other proteins in same PDB: d1efca1, d1efca3, d1efcb1, d1efcb3
  2. Domain d1efcb2: 1efc B:297-393 [25721]
    Other proteins in same PDB: d1efca1, d1efca3, d1efcb1, d1efcb3
    complexed with gdp, mg
4. Domains for 1efu:
  1. Domain d1efua2: 1efu A:297-393 [25722]
    Other proteins in same PDB: d1efua1, d1efua3, d1efub2, d1efub3, d1efub4, d1efuc1, d1efuc3, d1efud2, d1efud3, d1efud4
  2. Domain d1efuc2: 1efu C:297-393 [25723]
    Other proteins in same PDB: d1efua1, d1efua3, d1efub2, d1efub3, d1efub4, d1efuc1, d1efuc3, d1efud2, d1efud3, d1efud4
5. Domain for 1ob2:
  - Domain d1ob2a2: 1ob2 A:297-393 [103901]
    Other proteins in same PDB: d1ob2a1, d1ob2a3
    complexed with 2mg, 5mc, 7mg, gnp, h2u, kir, m2g, mad, mg, omc, omg, pha, psu, suc, yg
6. Domains for 2bvn:
  1. Domain d2bvna2: 2bvn A:297-392 [129283]
    Other proteins in same PDB: d2bvna1, d2bvna3, d2bvnb1, d2bvnb3
    automatically matched to d1d8ta2
    complexed with enx, gnp, mg
  2. Domain d2bvnb2: 2bvn B:297-392 [129286]
    Other proteins in same PDB: d2bvna1, d2bvna3, d2bvnb1, d2bvnb3
    automatically matched to d1d8ta2
    complexed with enx, gnp, mg
7. Domain for 2fx3:
  - Domain d2fx3a2: 2fx3 A:297-392 [134272]
    Other proteins in same PDB: d2fx3a1, d2fx3a3
    automatically matched to d1d8ta2
    complexed with gdp, mg

Thermus aquaticus [TaxId:271] [50469] (4 PDB entries)

Domain for 1b23:
- Domain d1b23p2: 1b23 P:313-405 [25729]
  Other proteins in same PDB: d1b23p1, d1b23p3
  complexed with aac, gnp, h2u, mg, mia, psu, s4u, so4
Domain for 1eft:
- Domain d1efta2: 1eft A:313-405 [25728]
  Other proteins in same PDB: d1efta1, d1efta3
  complexed with gnp, mg

Domains for 1ttt:

Domain d1ttta2: 1ttt A:314-405 [25730]
Other proteins in same PDB: d1ttta1, d1ttta3, d1tttb1, d1tttb3, d1tttc1, d1tttc3
Domain d1tttb2: 1ttt B:313-405 [25731]
Other proteins in same PDB: d1ttta1, d1ttta3, d1tttb1, d1tttb3, d1tttc1, d1tttc3

Domain d1tttc2: 1ttt C:313-405 [25732]
Other proteins in same PDB: d1ttta1, d1ttta3, d1tttb1, d1tttb3, d1tttc1, d1tttc3
protein/tRNA complex; complexed with 1ma, 2mg, 5mc, 5mu, 7mg, gnp, h2u, m2g, mg, omc, omg, psu, yg

Domains for 1tui:
1. Domain d1tuia2: 1tui A:314-405 [25733]
  Other proteins in same PDB: d1tuia1, d1tuia3, d1tuib1, d1tuib3, d1tuic1, d1tuic3
2. Domain d1tuib2: 1tui B:313-405 [25734]
  Other proteins in same PDB: d1tuia1, d1tuia3, d1tuib1, d1tuib3, d1tuic1, d1tuic3
3. Domain d1tuic2: 1tui C:313-405 [25735]
  Other proteins in same PDB: d1tuia1, d1tuia3, d1tuib1, d1tuib3, d1tuic1, d1tuic3
  complexed with gdp, mg

Thermus thermophilus [TaxId:274] [50470] (7 PDB entries)

Domains for 1aip:

Domain d1aipa2: 1aip A:313-405 [25737]
Other proteins in same PDB: d1aipa1, d1aipa3, d1aipb1, d1aipb3, d1aipc1, d1aipc2, d1aipd1, d1aipd2, d1aipe1, d1aipe3, d1aipf1, d1aipf3, d1aipg1, d1aipg2, d1aiph1, d1aiph2

Domain d1aipb2: 1aip B:313-405 [25738]
Other proteins in same PDB: d1aipa1, d1aipa3, d1aipb1, d1aipb3, d1aipc1, d1aipc2, d1aipd1, d1aipd2, d1aipe1, d1aipe3, d1aipf1, d1aipf3, d1aipg1, d1aipg2, d1aiph1, d1aiph2

Domain d1aipe2: 1aip E:313-405 [25739]
Other proteins in same PDB: d1aipa1, d1aipa3, d1aipb1, d1aipb3, d1aipc1, d1aipc2, d1aipd1, d1aipd2, d1aipe1, d1aipe3, d1aipf1, d1aipf3, d1aipg1, d1aipg2, d1aiph1, d1aiph2

Domain d1aipf2: 1aip F:313-405 [25740]
Other proteins in same PDB: d1aipa1, d1aipa3, d1aipb1, d1aipb3, d1aipc1, d1aipc2, d1aipd1, d1aipd2, d1aipe1, d1aipe3, d1aipf1, d1aipf3, d1aipg1, d1aipg2, d1aiph1, d1aiph2

Domain for 1exm:
- Domain d1exma2: 1exm A:313-405 [25736]
  Other proteins in same PDB: d1exma1, d1exma3
  complexed with gnp, mg
Domains for 1ha3:
1. Domain d1ha3a2: 1ha3 A:313-405 [60870]
  Other proteins in same PDB: d1ha3a1, d1ha3a3, d1ha3b1, d1ha3b3
2. Domain d1ha3b2: 1ha3 B:313-405 [60873]
  Other proteins in same PDB: d1ha3a1, d1ha3a3, d1ha3b1, d1ha3b3
  complexed with bme, gdp, mau, mg

Domains for 1ob5:

Domain d1ob5a2: 1ob5 A:313-405 [118692]
Other proteins in same PDB: d1ob5a1, d1ob5a3, d1ob5c1, d1ob5c3, d1ob5e1, d1ob5e3
automatically matched to d1aipa2
complexed with 2mg, 5mc, 5mu, 7mg, c, enx, gnp, h2u, m2g, mad, mg, omc, omg, pha, psu, yg

Domain d1ob5c2: 1ob5 C:313-405 [118695]
Other proteins in same PDB: d1ob5a1, d1ob5a3, d1ob5c1, d1ob5c3, d1ob5e1, d1ob5e3
automatically matched to d1aipa2
complexed with 2mg, 5mc, 5mu, 7mg, c, enx, gnp, h2u, m2g, mad, mg, omc, omg, pha, psu, yg

Domain d1ob5e2: 1ob5 E:313-405 [118698]
Other proteins in same PDB: d1ob5a1, d1ob5a3, d1ob5c1, d1ob5c3, d1ob5e1, d1ob5e3
automatically matched to d1aipa2
complexed with 2mg, 5mc, 5mu, 7mg, c, enx, gnp, h2u, m2g, mad, mg, omc, omg, pha, psu, yg

Domain for 1zc8:
- Domain d1zc8y2: 1zc8 Y:313-405 [124894]
  Other proteins in same PDB: d1zc8k1, d1zc8y1, d1zc8y3
  automatically matched to d1aipa2
  complexed with du
Domain for 2c77:
- Domain d2c77a2: 2c77 A:313-405 [130035]
  Other proteins in same PDB: d2c77a1, d2c77a3
  automatically matched to d1aipa2
  complexed with gea, gnp, mg, peg
Domain for 2c78:
- Domain d2c78a2: 2c78 A:313-405 [130038]
  Other proteins in same PDB: d2c78a1, d2c78a3
  automatically matched to d1aipa2
  complexed with gnp, mg, pul

More info for Protein Elongation factor Tu (EF-Tu) from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain

Timeline for Protein Elongation factor Tu (EF-Tu) from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain:

Protein Elongation factor Tu (EF-Tu) from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain first appeared (with stable ids) in SCOP 1.55, called Protein Elongation factor Tu (EF-Tu) from b.44.1.1: EF-Tu/eEF-1alpha C-terminal domain
Protein Elongation factor Tu (EF-Tu) from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain appears in SCOP 1.73
Protein Elongation factor Tu (EF-Tu) from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain appears in SCOPe 2.01
Protein Elongation factor Tu (EF-Tu) from b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain appears in the current release, SCOPe 2.08