SCOPe 2.06: Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain

Lineage for Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.44: Elongation factor/aminomethyltransferase common domain [50464] (2 superfamilies)
   barrel, closed; n=6, S=10; greek-key

4. Superfamily b.44.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain [50465] (2 families)
   probably related to the second domain and its superfamiy by a circular permutation

5. Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain [50466] (7 proteins)

Proteins:

1. Elongation factor eEF-1alpha, C-terminal domain [50472] (2 species)
   eukaryotic and archaeal homologue of EF-Tu

   1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [50473] (6 PDB entries)

   2. Species Sulfolobus solfataricus [TaxId:2287] [69277] (2 PDB entries)
      Uniprot P35021

2. Elongation factor SelB, domain 3 [117223] (1 species)

   • Species Methanococcus maripaludis [TaxId:39152] [117224] (3 PDB entries)
     Uniprot Q8J307

3. Elongation factor Tu (EF-Tu) [50467] (4 species)

   1. Species Cow (Bos taurus), mitochondrial [TaxId:9913] [50471] (2 PDB entries)
      Uniprot P49410 56-452

   2. Species Escherichia coli [TaxId:562] [50468] (8 PDB entries)
      Uniprot P02990

   3. Species Thermus aquaticus [TaxId:271] [50469] (4 PDB entries)

   4. Species Thermus thermophilus [TaxId:274] [50470] (4 PDB entries)

4. Eukaryotic peptide chain release factor ERF2, C-terminal domain [110229] (1 species)

   • Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [110230] (3 PDB entries)
     Uniprot O74718

5. Initiation factor eIF2 gamma subunit [74964] (3 species)

   1. Species Methanococcus jannaschii [TaxId:2190] [101789] (1 PDB entry)

   2. Species Pyrococcus abyssi [TaxId:29292] [74965] (5 PDB entries)

   3. Species Sulfolobus solfataricus [TaxId:2287] [141344] (10 PDB entries)
      Uniprot Q980A5 321-415

6. Sulfate adenylate transferase subunit cysN/C, EF-Tu domain 3-like domain [141345] (1 species)

   • Species Pseudomonas syringae pv. tomato [TaxId:323] [141346] (1 PDB entry)
     Uniprot Q87WW1 330-434

7. automated matches [336429] (1 species)
   not a true protein

   • Species Escherichia coli [TaxId:469008] [336430] (1 PDB entry)

More info for Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain

Timeline for Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain:

• Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain first appeared (with stable ids) in SCOP 1.55, called Family b.44.1.1: EF-Tu/eEF-1alpha C-terminal domain
  
• Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain appears in SCOPe 2.05
  
• Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain appears in SCOPe 2.07
  
• Family b.44.1.1: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain appears in the current release, SCOPe 2.08