Lineage for Protein: Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2053108Fold b.42: beta-Trefoil [50352] (8 superfamilies)
    barrel, closed; n=6, S=12; and a hairpin triplet; meander
    duplication: has internal pseudo threefold symmetry
  4. 2053527Superfamily b.42.2: Ricin B-like lectins [50370] (4 families) (S)
  5. 2053528Family b.42.2.1: Ricin B-like [50371] (11 protein domains)
  6. 2053667Protein Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) [50377] (2 species)

Species:

  1. 2053668Streptomyces lividans [TaxId:1916] [74958] (3 PDB entries)
    1. Domain for 1knl:
    2. Domain for 1knm:
    3. Domain for 1mc9:
  2. 2053672Streptomyces olivaceoviridis [TaxId:1921] [50378] (11 PDB entries)
    1. Domains for 1isv:
      1. 2053683Domain d1isva1: 1isv A:304-436 [66341]
        Other proteins in same PDB: d1isva2, d1isvb2
        complexed with xyp
      2. 2053684Domain d1isvb1: 1isv B:804-936 [66343]
        Other proteins in same PDB: d1isva2, d1isvb2
        complexed with xyp
    2. Domains for 1isw:
      1. 2053691Domain d1iswa1: 1isw A:304-436 [66345]
        Other proteins in same PDB: d1iswa2, d1iswb2
        complexed with xyp
      2. 2053692Domain d1iswb1: 1isw B:804-936 [66347]
        Other proteins in same PDB: d1iswa2, d1iswb2
        complexed with xyp
    3. Domains for 1isx:
      1. 2053687Domain d1isxa1: 1isx A:304-436 [66349]
        Other proteins in same PDB: d1isxa2, d1isxb2
        complexed with xyp
      2. 2053688Domain d1isxb1: 1isx B:804-936 [66351]
        Other proteins in same PDB: d1isxa2, d1isxb2
        complexed with xyp
    4. Domains for 1isy:
      1. 2053685Domain d1isya1: 1isy A:304-436 [66353]
        Other proteins in same PDB: d1isya2, d1isyb2
        complexed with bgc
      2. 2053686Domain d1isyb1: 1isy B:804-936 [66355]
        Other proteins in same PDB: d1isya2, d1isyb2
        complexed with bgc
    5. Domains for 1isz:
      1. 2053677Domain d1isza1: 1isz A:313-436 [66357]
        Other proteins in same PDB: d1isza2, d1iszb2
        complexed with gal
      2. 2053678Domain d1iszb1: 1isz B:813-936 [66359]
        Other proteins in same PDB: d1isza2, d1iszb2
        complexed with gal
    6. Domains for 1it0:
      1. 2053679Domain d1it0a1: 1it0 A:313-436 [66361]
        Other proteins in same PDB: d1it0a2, d1it0b2
        complexed with lat
      2. 2053680Domain d1it0b1: 1it0 B:813-936 [66363]
        Other proteins in same PDB: d1it0a2, d1it0b2
        complexed with lat
    7. Domains for 1v6u:
      1. 2053693Domain d1v6ua1: 1v6u A:304-436 [100426]
        Other proteins in same PDB: d1v6ua2, d1v6ub2
        complexed with xyp, xys
      2. 2053694Domain d1v6ub1: 1v6u B:804-936 [100428]
        Other proteins in same PDB: d1v6ua2, d1v6ub2
        complexed with xyp, xys
    8. Domains for 1v6v:
      1. 2053681Domain d1v6va1: 1v6v A:304-436 [100430]
        Other proteins in same PDB: d1v6va2, d1v6vb2
        complexed with xyp
      2. 2053682Domain d1v6vb1: 1v6v B:804-936 [100432]
        Other proteins in same PDB: d1v6va2, d1v6vb2
        complexed with xyp
    9. Domains for 1v6w:
      1. 2053675Domain d1v6wa1: 1v6w A:304-436 [100434]
        Other proteins in same PDB: d1v6wa2, d1v6wb2
        complexed with xyp
      2. 2053676Domain d1v6wb1: 1v6w B:804-936 [100436]
        Other proteins in same PDB: d1v6wa2, d1v6wb2
        complexed with xyp
    10. Domains for 1v6x:
      1. 2053689Domain d1v6xa1: 1v6x A:304-436 [100438]
        Other proteins in same PDB: d1v6xa2, d1v6xb2
        complexed with xyp
      2. 2053690Domain d1v6xb1: 1v6x B:804-936 [100440]
        Other proteins in same PDB: d1v6xa2, d1v6xb2
        complexed with xyp
    11. Domains for 1xyf:
      1. 2053673Domain d1xyfa1: 1xyf A:313-436 [25577]
        Other proteins in same PDB: d1xyfa2, d1xyfb2
      2. 2053674Domain d1xyfb1: 1xyf B:813-936 [25578]
        Other proteins in same PDB: d1xyfa2, d1xyfb2

More info for Protein Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) from b.42.2.1: Ricin B-like

Timeline for Protein Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) from b.42.2.1: Ricin B-like: