Lineage for Species: Sambucus ebulus, ebulin [TaxId: 28503]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2384842Fold b.42: beta-Trefoil [50352] (8 superfamilies)
    barrel, closed; n=6, S=12; and a hairpin triplet; meander
    duplication: has internal pseudo threefold symmetry
  4. 2385272Superfamily b.42.2: Ricin B-like lectins [50370] (4 families) (S)
  5. 2385273Family b.42.2.1: Ricin B-like [50371] (11 protein domains)
  6. 2385359Protein Plant cytotoxin B-chain (lectin) [50372] (5 species)
    duplication: consists of two domains of this fold
  7. 2385400Species Sambucus ebulus, ebulin [TaxId:28503] [50376] (4 PDB entries)

PDB entries in Species: Sambucus ebulus, ebulin [TaxId: 28503]:

  1. Domain(s) for 1hwm:
    1. 2385401Domain d1hwmb1: 1hwm B:3-135 [25569]
      Other proteins in same PDB: d1hwma_
      complexed with bma, gal, man, nag
    2. 2385402Domain d1hwmb2: 1hwm B:136-266 [25570]
      Other proteins in same PDB: d1hwma_
      complexed with bma, gal, man, nag
  2. Domain(s) for 1hwn:
    1. 2385403Domain d1hwnb1: 1hwn B:2-135 [25573]
      Other proteins in same PDB: d1hwna_
      complexed with gal, nag
    2. 2385404Domain d1hwnb2: 1hwn B:136-264 [25574]
      Other proteins in same PDB: d1hwna_
      complexed with gal, nag
  3. Domain(s) for 1hwo:
    1. 2385405Domain d1hwob1: 1hwo B:2-135 [25571]
      Other proteins in same PDB: d1hwoa_
      complexed with bma, gal, glc, nag
    2. 2385406Domain d1hwob2: 1hwo B:136-264 [25572]
      Other proteins in same PDB: d1hwoa_
      complexed with bma, gal, glc, nag
  4. Domain(s) for 1hwp:
    1. 2385407Domain d1hwpb1: 1hwp B:2-135 [25575]
      Other proteins in same PDB: d1hwpa_
      complexed with bgc, bma, gal, nag, pt1
    2. 2385408Domain d1hwpb2: 1hwp B:136-264 [25576]
      Other proteins in same PDB: d1hwpa_
      complexed with bgc, bma, gal, nag, pt1

More info for Species Sambucus ebulus, ebulin [TaxId:28503] from b.42.2.1 Plant cytotoxin B-chain (lectin)

Timeline for Species Sambucus ebulus, ebulin [TaxId:28503] from b.42.2.1 Plant cytotoxin B-chain (lectin):