Lineage for Protein: Plant cytotoxin B-chain (lectin)

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 464258Fold b.42: beta-Trefoil [50352] (8 superfamilies)
    barrel, closed; n=6, S=12; and a hairpin triplet; meander
    duplication: has internal pseudo threefold symmetry
  4. 464433Superfamily b.42.2: Ricin B-like lectins [50370] (2 families) (S)
  5. 464434Family b.42.2.1: Ricin B-like [50371] (6 proteins)
  6. 464453Protein Plant cytotoxin B-chain (lectin) [50372] (5 species)
    duplication: consists of two domains of this fold

Species:

  1. 464454Abrus precatorius [TaxId:3816] [50374] (1 PDB entry)
  2. 464457Castor bean (Ricinus communis), Ricin [TaxId:3988] [50373] (1 PDB entry)
  3. 464460European mistletoe (Viscum album) [TaxId:3972] [50375] (9 PDB entries)
    different sequence variants
    1. Domains for 1ce7:
      1. 464473Domain d1ce7b1: 1ce7 B:1-133 [25565]
        Other proteins in same PDB: d1ce7a_
      2. 464474Domain d1ce7b2: 1ce7 B:134-255 [25566]
        Other proteins in same PDB: d1ce7a_
    2. Domains for 1m2t:
      1. 464461Domain d1m2tb1: 1m2t B:249-384 [84762]
        Other proteins in same PDB: d1m2ta_
      2. 464462Domain d1m2tb2: 1m2t B:385-510 [84763]
        Other proteins in same PDB: d1m2ta_
    3. Domains for 1onk:
      1. 464463Domain d1onkb1: 1onk B:1-137 [93360]
        Other proteins in same PDB: d1onka_
      2. 464464Domain d1onkb2: 1onk B:138-263 [93361]
        Other proteins in same PDB: d1onka_
    4. Domains for 1oql:
      1. 464469Domain d1oqlb1: 1oql B:1-137 [87307]
        Other proteins in same PDB: d1oqla_
      2. 464470Domain d1oqlb2: 1oql B:138-263 [87308]
        Other proteins in same PDB: d1oqla_
    5. Domains for 1pc8:
      1. 464477Domain d1pc8b1: 1pc8 B:1-133 [104105]
        Other proteins in same PDB: d1pc8a_
      2. 464478Domain d1pc8b2: 1pc8 B:134-255 [104106]
        Other proteins in same PDB: d1pc8a_
    6. Domains for 1pum:
      1. 464467Domain d1pumb1: 1pum B:1-137 [104315]
        Other proteins in same PDB: d1puma_
      2. 464468Domain d1pumb2: 1pum B:138-263 [104316]
        Other proteins in same PDB: d1puma_
    7. Domains for 1puu:
      1. 464465Domain d1puub1: 1puu B:248-384 [104318]
        Other proteins in same PDB: d1puua_
      2. 464466Domain d1puub2: 1puu B:385-507 [104319]
        Other proteins in same PDB: d1puua_
    8. Domains for 1tfm:
      1. 464471Domain d1tfmb1: 1tfm B:1-133 [106856]
        Other proteins in same PDB: d1tfma_
      2. 464472Domain d1tfmb2: 1tfm B:134-255 [106857]
        Other proteins in same PDB: d1tfma_
    9. Domains for 2mll:
      1. 464475Domain d2mllb1: 2mll B:1-133 [25567]
        Other proteins in same PDB: d2mlla_
      2. 464476Domain d2mllb2: 2mll B:134-255 [25568]
        Other proteins in same PDB: d2mlla_
  4. 464479Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId:3677] [89337] (1 PDB entry)
  5. 464482Sambucus ebulus, ebulin [TaxId:28503] [50376] (4 PDB entries)
    1. Domains for 1hwm:
      1. 464483Domain d1hwmb1: 1hwm B:3-135 [25569]
        Other proteins in same PDB: d1hwma_
      2. 464484Domain d1hwmb2: 1hwm B:136-266 [25570]
        Other proteins in same PDB: d1hwma_
    2. Domains for 1hwn:
      1. 464487Domain d1hwnb1: 1hwn B:2-135 [25573]
        Other proteins in same PDB: d1hwna_
      2. 464488Domain d1hwnb2: 1hwn B:136-264 [25574]
        Other proteins in same PDB: d1hwna_
    3. Domains for 1hwo:
      1. 464485Domain d1hwob1: 1hwo B:2-135 [25571]
        Other proteins in same PDB: d1hwoa_
      2. 464486Domain d1hwob2: 1hwo B:136-264 [25572]
        Other proteins in same PDB: d1hwoa_
    4. Domains for 1hwp:
      1. 464489Domain d1hwpb1: 1hwp B:2-135 [25575]
        Other proteins in same PDB: d1hwpa_
      2. 464490Domain d1hwpb2: 1hwp B:136-264 [25576]
        Other proteins in same PDB: d1hwpa_

More info for Protein Plant cytotoxin B-chain (lectin) from b.42.2.1: Ricin B-like

Timeline for Protein Plant cytotoxin B-chain (lectin) from b.42.2.1: Ricin B-like: