Class b: All beta proteins [48724] (177 folds) |
Fold b.42: beta-Trefoil [50352] (8 superfamilies) barrel, closed; n=6, S=12; and a hairpin triplet; meander duplication: has internal pseudo threefold symmetry |
Superfamily b.42.2: Ricin B-like lectins [50370] (4 families) |
Family b.42.2.1: Ricin B-like [50371] (11 proteins) |
29-kDa galactose-binding lectin [159148] (1 species) duplication: tadem repeat of two Ricin B-like domains |
Species Common earthworm (Lumbricus terrestris) [TaxId:6398] [159149] (5 PDB entries) Uniprot O96048 131-260 |
Agglutinin MOA, N-terminal domain [159152] (1 species) |
Species Fairy-ring mushroom (Marasmius oreades) [TaxId:181124] [159153] (2 PDB entries) Uniprot Q8X123 2-155 |
Agglutinin-1 chain B [159150] (1 species) |
Species Abrus precatorius [TaxId:3816] [159151] (2 PDB entries) Uniprot Q9M6E9 287-420! Uniprot Q9M6E9 421-547 |
Cytolethal distending toxin subunit A [110207] (2 species) |
Species Actinobacillus actinomycetemcomitans [TaxId:714] [141329] (1 PDB entry) Uniprot O87120 70-222 |
Species Haemophilus ducreyi [TaxId:730] [110208] (1 PDB entry) Uniprot O06522 57-223 |
Cytolethal distending toxin subunit C [110209] (2 species) |
Species Actinobacillus actinomycetemcomitans [TaxId:714] [141330] (1 PDB entry) Uniprot Q7DK11 25-178 |
Species Haemophilus ducreyi [TaxId:730] [110210] (1 PDB entry) Uniprot O06524 25-178 |
Hemagglutinin component Ha1 [101784] (2 species) |
Species Clostridium botulinum D phage [TaxId:29342] [101785] (1 PDB entry) |
Species Clostridium botulinum [TaxId:1491] [159147] (3 PDB entries) |
Hemolytic lectin CEL-III, domains 1 and 2 [110211] (1 species) |
Species Cucumaria echinata [TaxId:40245] [110212] (4 PDB entries) Uniprot Q868M7 11-442 |
Plant cytotoxin B-chain (lectin) [50372] (5 species) duplication: consists of two domains of this fold |
Species Abrus precatorius [TaxId:3816] [50374] (1 PDB entry) |
Species Castor bean (Ricinus communis), Ricin [TaxId:3988] [50373] (3 PDB entries) Uniprot P06750 303-564 |
Species European mistletoe (Viscum album) [TaxId:3972] [50375] (12 PDB entries) different sequence variants Uniprot Q6ITZ3 266-520; Uniprot P81446 269-531 # 91% sequence identity |
Species Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId:3677] [89337] (1 PDB entry) |
Species Sambucus ebulus, ebulin [TaxId:28503] [50376] (4 PDB entries) |
Polypeptide N-acetylgalactosaminyltransferase 1, C-terminal domain [117210] (1 species) |
Species Mouse (Mus musculus) [TaxId:10090] [117211] (1 PDB entry) Uniprot O08912 |
Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) [50377] (2 species) |
Species Streptomyces lividans [TaxId:1916] [74958] (3 PDB entries) |
Species Streptomyces olivaceoviridis [TaxId:1921] [50378] (11 PDB entries) |
automated matches [190608] (4 species) not a true protein |
Species Clostridium botulinum [TaxId:1491] [230685] (7 PDB entries) |
Species Common earthworm (Lumbricus terrestris) [TaxId:6398] [187630] (3 PDB entries) |
Species European mistletoe (Viscum album) [TaxId:3972] [225471] (6 PDB entries) |
Species Marasmius oreades [TaxId:181124] [336588] (1 PDB entry) |
Timeline for Family b.42.2.1: Ricin B-like: