Lineage for Family b.42.2.1: Ricin B-like

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 464258Fold b.42: beta-Trefoil [50352] (8 superfamilies)
    barrel, closed; n=6, S=12; and a hairpin triplet; meander
    duplication: has internal pseudo threefold symmetry
  4. 464433Superfamily b.42.2: Ricin B-like lectins [50370] (2 families) (S)
  5. 464434Family b.42.2.1: Ricin B-like [50371] (6 proteins)

Proteins:

  1. 464435Cytolethal distending toxin subunit A [110207] (1 species)
  2. 464438Cytolethal distending toxin subunit C [110209] (1 species)
  3. 464441Hemagglutinin component Ha1 [101784] (1 species)
  4. 464447Hemolytic lectin CEL-III, domains 1 and 2 [110211] (1 species)
  5. 464453Plant cytotoxin B-chain (lectin) [50372] (5 species)
    duplication: consists of two domains of this fold
    1. 464454Species Abrus precatorius [TaxId:3816] [50374] (1 PDB entry)
    2. 464457Species Castor bean (Ricinus communis), Ricin [TaxId:3988] [50373] (1 PDB entry)
    3. 464460Species European mistletoe (Viscum album) [TaxId:3972] [50375] (9 PDB entries)
      different sequence variants
    4. 464479Species Mongolian snake-gourd (Trichosanthes kirilowii), Lectin 1 [TaxId:3677] [89337] (1 PDB entry)
    5. 464482Species Sambucus ebulus, ebulin [TaxId:28503] [50376] (4 PDB entries)
  6. 464491Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain) [50377] (2 species)
    1. 464492Species Streptomyces lividans [TaxId:1916] [74958] (3 PDB entries)
    2. 464496Species Streptomyces olivaceoviridis [TaxId:1921] [50378] (11 PDB entries)

More info for Family b.42.2.1: Ricin B-like

Timeline for Family b.42.2.1: Ricin B-like: