SCOPe 2.06: Protein: Inorganic pyrophosphatase

Lineage for Protein: Inorganic pyrophosphatase

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)
Fold b.40: OB-fold [50198] (16 superfamilies)
barrel, closed or partly opened n=5, S=10 or S=8; greek-key
Superfamily b.40.5: Inorganic pyrophosphatase [50324] (2 families)
Family b.40.5.1: Inorganic pyrophosphatase [50325] (2 proteins)
barrel, closed; n=5, S=8
Protein Inorganic pyrophosphatase [50326] (7 species)
eukaryotic enzyme has additional secondary structures at both N- and C-termini

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [50327] (19 PDB entries)
1. Domains for 117e:
  1. Domain d117ea_: 117e A: [25401]
    complexed with mn, po4
  2. Domain d117eb_: 117e B: [25402]
    complexed with mn, po4
2. Domains for 1e6a:
  1. Domain d1e6aa_: 1e6a A: [59292]
    complexed with f, mn, na, po4, pop
  2. Domain d1e6ab_: 1e6a B: [59293]
    complexed with f, mn, na, po4, pop
3. Domains for 1e9g:
  1. Domain d1e9ga_: 1e9g A: [59393]
    complexed with mn, po4
  2. Domain d1e9gb_: 1e9g B: [59394]
    complexed with mn, po4
4. Domains for 1huj:
  1. Domain d1huja_: 1huj A: [25403]
    complexed with mg; mutant
  2. Domain d1hujb_: 1huj B: [25404]
    complexed with mg; mutant
5. Domains for 1huk:
  1. Domain d1huka_: 1huk A: [25405]
    complexed with mg; mutant
  2. Domain d1hukb_: 1huk B: [25406]
    complexed with mg; mutant
6. Domains for 1m38:
  1. Domain d1m38a_: 1m38 A: [78531]
    complexed with co, po4
  2. Domain d1m38b_: 1m38 B: [78532]
    complexed with co, po4
7. Domains for 1pyp:
  1. Domain d1pypa_: 1pyp A: [25409]
  2. Domain d1pypb_: 1pyp B: [118584]
    duplicate of 1PYP
8. Domains for 1wgi:
  1. Domain d1wgia_: 1wgi A: [25399]
    complexed with mn
  2. Domain d1wgib_: 1wgi B: [25400]
    complexed with mn
9. Domains for 1wgj:
  1. Domain d1wgja_: 1wgj A: [25397]
    complexed with mn, po4
  2. Domain d1wgjb_: 1wgj B: [25398]
    complexed with mn, po4
10. Domains for 1ypp:
  1. Domain d1yppa_: 1ypp A: [25407]
    complexed with mn, po4
  2. Domain d1yppb_: 1ypp B: [25408]
    complexed with mn, po4
11. Domains for 2ihp:
  1. Domain d2ihpa_: 2ihp A: [137421]
    automated match to d1e6aa_
    complexed with mes, mg, po4
  2. Domain d2ihpb_: 2ihp B: [137422]
    automated match to d1e6aa_
    complexed with mes, mg, po4
12. Domains for 2ik0:
  1. Domain d2ik0a_: 2ik0 A: [165590]
    automated match to d1e6aa_
    complexed with mg, mpd, po4
  2. Domain d2ik0b_: 2ik0 B: [165591]
    automated match to d1e6aa_
    complexed with mg, mpd, po4
13. Domains for 2ik1:
  1. Domain d2ik1a_: 2ik1 A: [165592]
    automated match to d1e6aa_
    complexed with mes, mg
  2. Domain d2ik1b_: 2ik1 B: [165593]
    automated match to d1e6aa_
    complexed with mes, mg
14. Domains for 2ik2:
  1. Domain d2ik2a_: 2ik2 A: [165594]
    automated match to d1e6aa_
    complexed with mg, po4
  2. Domain d2ik2b_: 2ik2 B: [165595]
    automated match to d1e6aa_
    complexed with mg, po4
15. Domains for 2ik4:
  1. Domain d2ik4a_: 2ik4 A: [137482]
    automated match to d1e6aa_
    complexed with mg, po4
  2. Domain d2ik4b_: 2ik4 B: [137483]
    automated match to d1e6aa_
    complexed with mg, po4
16. Domains for 2ik6:
  1. Domain d2ik6a_: 2ik6 A: [165596]
    automated match to d1e6aa_
    complexed with mg, mpd, po4
  2. Domain d2ik6b_: 2ik6 B: [165597]
    automated match to d1e6aa_
    complexed with mg, mpd, po4
17. Domains for 2ik7:
  1. Domain d2ik7a_: 2ik7 A: [165598]
    automated match to d1e6aa_
    complexed with mg, po4
  2. Domain d2ik7b_: 2ik7 B: [165599]
    automated match to d1e6aa_
    complexed with mg, po4
18. Domains for 2ik9:
  1. Domain d2ik9a_: 2ik9 A: [165600]
    automated match to d1e6aa_
    complexed with mg, po4
  2. Domain d2ik9b_: 2ik9 B: [165601]
    automated match to d1e6aa_
    complexed with mg, po4
19. Domains for 8prk:
  1. Domain d8prka_: 8prk A: [25395]
    complexed with mn, po4
  2. Domain d8prkb_: 8prk B: [25396]
    complexed with mn, po4
Escherichia coli [TaxId:562] [50329] (19 PDB entries)
1. Domain for 1faj:
  - Domain d1faja_: 1faj A: [25429]
2. Domain for 1i40:
  - Domain d1i40a_: 1i40 A: [66024]
    complexed with ca, cl, na
3. Domain for 1i6t:
  - Domain d1i6ta_: 1i6t A: [66045]
    complexed with ca, cl, na, pop
4. Domain for 1igp:
  - Domain d1igpa_: 1igp A: [25434]
5. Domain for 1ino:
  - Domain d1inoa_: 1ino A: [25432]
    complexed with mn
6. Domains for 1ipw:
  1. Domain d1ipwa_: 1ipw A: [25427]
    complexed with mg
  2. Domain d1ipwb_: 1ipw B: [25428]
    complexed with mg
7. Domains for 1jfd:
  1. Domain d1jfda_: 1jfd A: [25425]
    complexed with so4
  2. Domain d1jfdb_: 1jfd B: [25426]
    complexed with so4
8. Domains for 1mjw:
  1. Domain d1mjwa_: 1mjw A: [25419]
    complexed with so4; mutant
  2. Domain d1mjwb_: 1mjw B: [25420]
    complexed with so4; mutant
9. Domains for 1mjx:
  1. Domain d1mjxa_: 1mjx A: [25430]
    complexed with so4; mutant
  2. Domain d1mjxb_: 1mjx B: [25431]
    complexed with so4; mutant
10. Domains for 1mjy:
  1. Domain d1mjya_: 1mjy A: [25421]
    mutant
  2. Domain d1mjyb_: 1mjy B: [25422]
    mutant
11. Domain for 1mjz:
  - Domain d1mjza_: 1mjz A: [25433]
    mutant
12. Domains for 1obw:
  1. Domain d1obwa_: 1obw A: [25416]
    complexed with mg
  2. Domain d1obwb_: 1obw B: [25417]
    complexed with mg
  3. Domain d1obwc_: 1obw C: [25418]
    complexed with mg
13. Domain for 2au6:
  - Domain d2au6a_: 2au6 A: [127323]
    automated match to d1i40a_
    complexed with cl, f, mn, na, po4, pop
14. Domain for 2au7:
  - Domain d2au7a_: 2au7 A: [162898]
    automated match to d1i40a_
    complexed with cl, mn, na, po4
15. Domain for 2au8:
  - Domain d2au8a_: 2au8 A: [127324]
    automated match to d1i40a_
    complexed with cl, mn, na, po4
16. Domain for 2au9:
  - Domain d2au9a_: 2au9 A: [127325]
    automated match to d1i40a_
    complexed with cl, f, mn, na, pop
17. Domain for 2auu:
  - Domain d2auua_: 2auu A: [127338]
    automated match to d1i40a_
    complexed with cl, f, mg, na, pop
18. Domains for 2eip:
  1. Domain d2eipa_: 2eip A: [25423]
  2. Domain d2eipb_: 2eip B: [25424]
19. Domains for 4um4:
  1. Domain d4um4a_: 4um4 A: [261297]
    automated match to d1jfda_
    complexed with so4
  2. Domain d4um4b_: 4um4 B: [261298]
    automated match to d1jfda_
    complexed with so4
  3. Domain d4um4c_: 4um4 C: [261299]
    automated match to d1jfda_
    complexed with so4
Pyrococcus furiosus [TaxId:2261] [117207] (1 PDB entry)
Uniprot Q8U438
- Domain for 1twl:
  - Domain d1twla_: 1twl A: [112764]
Pyrococcus horikoshii [TaxId:53953] [101771] (1 PDB entry)
- Domains for 1ude:
  1. Domain d1udea_: 1ude A: [99208]
  2. Domain d1udeb_: 1ude B: [99209]
  3. Domain d1udec_: 1ude C: [99210]
Sulfolobus acidocaldarius [TaxId:2285] [50328] (1 PDB entry)
- Domains for 1qez:
  1. Domain d1qeza_: 1qez A: [25410]
    complexed with mg
  2. Domain d1qezb_: 1qez B: [25411]
    complexed with mg
  3. Domain d1qezc_: 1qez C: [25412]
    complexed with mg
  4. Domain d1qezd_: 1qez D: [25413]
    complexed with mg
  5. Domain d1qeze_: 1qez E: [25414]
    complexed with mg
  6. Domain d1qezf_: 1qez F: [25415]
    complexed with mg
Thale cress (Arabidopsis thaliana) [TaxId:3702] [257893] (2 PDB entries)
1. Domains for 4lug:
  1. Domain d4luga_: 4lug A: [257894]
    automated match to d1twla_
    complexed with na
  2. Domain d4lugb_: 4lug B: [262988]
    automated match to d4luga_
    complexed with na
2. Domains for 5ls0:
  1. Domain d5ls0a_: 5ls0 A: [338907]
    automated match to d4lugb_
    complexed with mg, peg
  2. Domain d5ls0b_: 5ls0 B: [338905]
    automated match to d4lugb_
    complexed with mg, peg
Thermus thermophilus [TaxId:274] [50330] (1 PDB entry)
- Domain for 2prd:
  - Domain d2prda_: 2prd A: [25435]
    complexed with so4

More info for Protein Inorganic pyrophosphatase from b.40.5.1: Inorganic pyrophosphatase

Timeline for Protein Inorganic pyrophosphatase from b.40.5.1: Inorganic pyrophosphatase:

Protein Inorganic pyrophosphatase from b.40.5.1: Inorganic pyrophosphatase first appeared (with stable ids) in SCOP 1.55
Protein Inorganic pyrophosphatase from b.40.5.1: Inorganic pyrophosphatase appears in SCOPe 2.05
Protein Inorganic pyrophosphatase from b.40.5.1: Inorganic pyrophosphatase appears in SCOPe 2.07
Protein Inorganic pyrophosphatase from b.40.5.1: Inorganic pyrophosphatase appears in the current release, SCOPe 2.08