Lineage for Protein: RNA polymerase subunit RBP8

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2049950Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2051128Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families) (S)
  5. 2052082Family b.40.4.8: RNA polymerase subunit RBP8 [50321] (1 protein)
    duplication; contains tandem repeat of two incomplete OB-folds; forms a single barrel; n=8, S=10
    automatically mapped to Pfam PF03870
  6. 2052083Protein RNA polymerase subunit RBP8 [50322] (2 species)

Species:

  1. 2052084Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [50323] (35 PDB entries)
    Uniprot P20436
    1. Domain for 1a1d:
    2. Domain for 1i3q:
    3. Domain for 1i50:
    4. Domain for 1i6h:
    5. Domain for 1k83:
    6. Domain for 1twa:
    7. Domain for 1twc:
    8. Domain for 1twf:
    9. Domain for 1twg:
    10. Domain for 1twh:
    11. Domain for 2b63:
    12. Domain for 2b8k:
    13. Domain for 2e2h:
    14. Domain for 2e2i:
    15. Domain for 2e2j:
    16. Domain for 2ja5:
    17. Domain for 2ja6:
    18. Domains for 2ja7:
      1. 2052114Domain d2ja7h1: 2ja7 H:2-146 [138200]
        Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1
        automatically matched to d1a1d__
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
      2. 2052115Domain d2ja7t1: 2ja7 T:2-146 [138216]
        Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1
        automatically matched to d1a1d__
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
    19. Domain for 2ja8:
    20. Domain for 2nvq:
    21. Domain for 2nvt:
    22. Domain for 2nvx:
    23. Domain for 2nvy:
    24. Domain for 2nvz:
    25. Domain for 2r7z:
    26. Domain for 2r92:
    27. Domain for 2r93:
    28. Domain for 2vum:
    29. Domain for 2yu9:
    30. Domain for 3cqz:
    31. Domain for 3m3y:
    32. Domain for 3s1m:
    33. Domain for 3s1n:
    34. Domains for 4c2m:
      1. 2052095Domain d4c2mh_: 4c2m H: [228427]
        Other proteins in same PDB: d4c2m1_, d4c2me1, d4c2me2, d4c2mf_, d4c2mj_, d4c2mk_, d4c2ml_, d4c2mt1, d4c2mt2, d4c2mu_, d4c2my_, d4c2mz_
        automated match to d1twfh_
        complexed with so4, zn
      2. 2052096Domain d4c2mw_: 4c2m W: [228432]
        Other proteins in same PDB: d4c2m1_, d4c2me1, d4c2me2, d4c2mf_, d4c2mj_, d4c2mk_, d4c2ml_, d4c2mt1, d4c2mt2, d4c2mu_, d4c2my_, d4c2mz_
        automated match to d1twfh_
        complexed with so4, zn
    35. Domain for 4c3i:
  2. 2052122Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [224866] (2 PDB entries)
    1. Domain for 3rzo:
    2. Domain for 3s14:

More info for Protein RNA polymerase subunit RBP8 from b.40.4.8: RNA polymerase subunit RBP8

Timeline for Protein RNA polymerase subunit RBP8 from b.40.4.8: RNA polymerase subunit RBP8: