SCOPe 2.06: Protein: ATP-dependent DNA ligase

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)
Fold b.40: OB-fold [50198] (16 superfamilies)
barrel, closed or partly opened n=5, S=10 or S=8; greek-key
Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families)
Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain [50307] (5 proteins)
Protein ATP-dependent DNA ligase [50310] (2 species)

Bacteriophage T7 [TaxId:10760] [50311] (1 PDB entry)
- Domain for 1a0i:
  - Domain d1a0ia1: 1a0i A:241-349 [25363]
    Other proteins in same PDB: d1a0ia2
    protein/DNA complex; complexed with atp
Chlorella virus PBCV-1 [TaxId:10506] [50312] (4 PDB entries)
1. Domain for 1fvi:
  - Domain d1fvia1: 1fvi A:190-293 [25364]
    Other proteins in same PDB: d1fvia2
    complexed with amp, so4
2. Domain for 1p8l:
  - Domain d1p8la1: 1p8l A:190-297 [94363]
    Other proteins in same PDB: d1p8la2
    complexed with amp
3. Domain for 2q2t:
  - Domain d2q2ta1: 2q2t A:190-293 [150014]
    Other proteins in same PDB: d2q2ta2
    automatically matched to d1p8la1
    protein/DNA complex; complexed with amp
4. Domains for 2q2u:
  1. Domain d2q2ua1: 2q2u A:190-293 [150016]
    Other proteins in same PDB: d2q2ua2, d2q2ub2, d2q2uc2, d2q2ud2
    automatically matched to d1p8la1
    protein/DNA complex
  2. Domain d2q2ub1: 2q2u B:190-293 [150018]
    Other proteins in same PDB: d2q2ua2, d2q2ub2, d2q2uc2, d2q2ud2
    automatically matched to d1p8la1
    protein/DNA complex
  3. Domain d2q2uc1: 2q2u C:190-293 [150020]
    Other proteins in same PDB: d2q2ua2, d2q2ub2, d2q2uc2, d2q2ud2
    automatically matched to d1p8la1
    protein/DNA complex
  4. Domain d2q2ud1: 2q2u D:190-293 [150022]
    Other proteins in same PDB: d2q2ua2, d2q2ub2, d2q2uc2, d2q2ud2
    automatically matched to d1p8la1
    protein/DNA complex

Timeline for Protein ATP-dependent DNA ligase from b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain:

Protein ATP-dependent DNA ligase from b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain first appeared (with stable ids) in SCOP 1.55, called Protein ATP-dependent DNA ligase from b.40.4.6: DNA ligase/mRNA capping enzyme, domain 2
Protein ATP-dependent DNA ligase from b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain appears in SCOPe 2.05
Protein ATP-dependent DNA ligase from b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain appears in SCOPe 2.07
Protein ATP-dependent DNA ligase from b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain appears in the current release, SCOPe 2.08