Lineage for Protein: ATP-dependent DNA ligase

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2787872Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2789270Superfamily b.40.4: Nucleic acid-binding proteins [50249] (18 families) (S)
  5. 2790201Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain [50307] (5 proteins)
  6. 2790202Protein ATP-dependent DNA ligase [50310] (2 species)

Species:

  1. 2790203Bacteriophage T7 [TaxId:10760] [50311] (1 PDB entry)
  2. 2790205Chlorella virus PBCV-1 [TaxId:10506] [50312] (4 PDB entries)
    1. Domain for 1fvi:
    2. Domain for 1p8l:
    3. Domain for 2q2t:
      • 2790207Domain d2q2ta1: 2q2t A:190-293 [150014]
        Other proteins in same PDB: d2q2ta2
        automatically matched to d1p8la1
        protein/DNA complex; complexed with amp

        has additional insertions and/or extensions that are not grouped together
    4. Domains for 2q2u:
      1. 2790209Domain d2q2ua1: 2q2u A:190-293 [150016]
        Other proteins in same PDB: d2q2ua2, d2q2ub2, d2q2uc2, d2q2ud2
        automatically matched to d1p8la1
        protein/DNA complex

        has additional insertions and/or extensions that are not grouped together
      2. 2790210Domain d2q2ub1: 2q2u B:190-293 [150018]
        Other proteins in same PDB: d2q2ua2, d2q2ub2, d2q2uc2, d2q2ud2
        automatically matched to d1p8la1
        protein/DNA complex

        has additional insertions and/or extensions that are not grouped together
      3. 2790211Domain d2q2uc1: 2q2u C:190-293 [150020]
        Other proteins in same PDB: d2q2ua2, d2q2ub2, d2q2uc2, d2q2ud2
        automatically matched to d1p8la1
        protein/DNA complex

        has additional insertions and/or extensions that are not grouped together
      4. 2790212Domain d2q2ud1: 2q2u D:190-293 [150022]
        Other proteins in same PDB: d2q2ua2, d2q2ub2, d2q2uc2, d2q2ud2
        automatically matched to d1p8la1
        protein/DNA complex

        has additional insertions and/or extensions that are not grouped together

More info for Protein ATP-dependent DNA ligase from b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain

Timeline for Protein ATP-dependent DNA ligase from b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain: