SCOP 1.55: Family b.40.4.5: Cold shock DNA-binding domain-like

Lineage for Family b.40.4.5: Cold shock DNA-binding domain-like

1. Root: SCOP 1.55

2. Class b: All beta proteins [48724] (93 folds)

3. Fold b.40: OB-fold [50198] (7 superfamilies)

4. Superfamily b.40.4: Nucleic acid-binding proteins [50249] (8 families)

5. Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (9 proteins)

Proteins:

1. C-terminal domain of eukaryotic initiation translation factor 5a [50296] (2 species)

   1. Species Methanococcus jannaschii [TaxId:2190] [50297] (2 PDB entries)

   2. Species Pyrobaculum aerophilum [TaxId:13773] [50298] (1 PDB entry)

2. Major cold shock protein [50283] (3 species)

   1. Species Bacillus caldolyticus [TaxId:1394] [50286] (1 PDB entry)

   2. Species Bacillus subtilis [TaxId:1423] [50285] (4 PDB entries)

   3. Species Escherichia coli [TaxId:562] [50284] (2 PDB entries)

3. N-terminal domain of ribosomal protein L2 [50299] (2 species)

   1. Species Bacillus stearothermophilus [TaxId:1422] [50300] (1 PDB entry)

   2. Species Haloarcula marismortui [TaxId:2238] [50301] (1 PDB entry)

4. Rho termination factor, N-terminal, RNA-binding domain [50294] (1 species)

   • Species Escherichia coli [TaxId:562] [50295] (4 PDB entries)

5. Ribosomal protein S12 [50302] (1 species)

   • Species Thermus thermophilus [TaxId:274] [50303] (6 PDB entries)

6. Ribosomal protein S17 [50304] (2 species)

   1. Species Bacillus stearothermophilus [TaxId:1422] [50306] (1 PDB entry)

   2. Species Thermus thermophilus [TaxId:274] [50305] (6 PDB entries)

7. S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase [50287] (2 species)

   1. Species Escherichia coli [TaxId:562] [50288] (1 PDB entry)

   2. Species Streptomyces antibioticus [TaxId:1890] [50289] (1 PDB entry)

8. Translation initiation factor eIF1a [50292] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [50293] (1 PDB entry)

9. Translational initiation factor 1, IF1 [50290] (1 species)

   • Species Escherichia coli [TaxId:562] [50291] (2 PDB entries)

More info for Family b.40.4.5: Cold shock DNA-binding domain-like

Timeline for Family b.40.4.5: Cold shock DNA-binding domain-like:

• Family b.40.4.5: Cold shock DNA-binding domain-like appears in SCOP 1.57
  
• Family b.40.4.5: Cold shock DNA-binding domain-like appears in the current release, SCOPe 2.08