SCOPe 2.07: Family b.40.4.4: Myf domain

Lineage for Family b.40.4.4: Myf domain

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.40: OB-fold [50198] (17 superfamilies)
   barrel, closed or partly opened n=5, S=10 or S=8; greek-key

4. Superfamily b.40.4: Nucleic acid-binding proteins [50249] (18 families)

5. Family b.40.4.4: Myf domain [50277] (7 proteins)

Proteins:

1. C-terminal domain of metazoan tyrosyl-tRNA synthetase, TyrRS [89326] (1 species)
   EMAP II-like domain found in vertebrata and insect enzymes; free domain possesses a cytokine activity

   • Species Human (Homo sapiens) [TaxId:9606] [89327] (1 PDB entry)

2. C-terminal domain of methionyl-tRNA synthetase, MetRS-CD [82102] (1 species)

   • Species Pyrococcus abyssi [TaxId:29292] [82103] (1 PDB entry)

3. Domain B2 of PheRS-beta, PheT [50278] (1 species)

   • Species Thermus thermophilus [TaxId:274] [50279] (12 PDB entries)
     identical sequence to Thermus aquaticus, TaxId: 271

4. EMAP II [50280] (1 species)
   domain of the p43 protein

   • Species Human (Homo sapiens) [TaxId:9606] [50281] (3 PDB entries)

5. Structure-specific tRNA-binding protein TRBP111 [89328] (2 species)

   1. Species Aquifex aeolicus [TaxId:63363] [101763] (1 PDB entry)
      aq_422; putative methionyl-tRNA synthetase beta subunit

   2. Species Escherichia coli [TaxId:562] [89329] (2 PDB entries)
      YgjH

6. TRBP111 homolog CsaA [63770] (1 species)
   possesses export-related chaperone and tRNA-binding activities

   • Species Thermus thermophilus [TaxId:274] [63771] (1 PDB entry)

7. automated matches [191019] (1 species)
   not a true protein

   • Species Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [188801] (1 PDB entry)

More info for Family b.40.4.4: Myf domain

Timeline for Family b.40.4.4: Myf domain:

• Family b.40.4.4: Myf domain first appeared (with stable ids) in SCOP 1.55
  
• Family b.40.4.4: Myf domain appears in SCOPe 2.06
  
• Family b.40.4.4: Myf domain appears in the current release, SCOPe 2.08