Lineage for Family b.40.4.3: Single strand DNA-binding domain, SSB

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 558996Fold b.40: OB-fold [50198] (10 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 559685Superfamily b.40.4: Nucleic acid-binding proteins [50249] (13 families) (S)
  5. 559752Family b.40.4.3: Single strand DNA-binding domain, SSB [50263] (12 proteins)
    barrel, closed; n=5, S=10

Proteins:

  1. 559753Archaeal ssDNA-binding protein [89324] (1 species)
    similar to the domains of the Replication protein A
  2. 559757CDC13 ssDNA-binding domain [74948] (1 species)
  3. 559761Core domain of telomere end binding protein beta subunit [50275] (1 species)
  4. 559776Hypothetical protein At4g28440 (F20O9.120) [117193] (1 species)
  5. 559779OB-fold domains of BRCA2 [82099] (2 species)
    duplication: tandem repeat of three OB-fold domains
    1. 559780Species Mouse (Mus musculus) [TaxId:10090] [82100] (2 PDB entries)
    2. 559787Species Rat (Rattus norvegicus) [TaxId:10116] [82101] (1 PDB entry)
  6. 559794Primosomal replication protein N, PriB [117191] (1 species)
  7. 559800Protection of telomeres protein 1, Pot1 [101761] (2 species)
    1. 559801Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [101762] (2 PDB entries)
    2. 559810Species Human (Homo sapiens) [TaxId:9606] [117190] (1 PDB entry)
  8. 559813Replication protein A 14 KDa (RPA14) subunit [50271] (1 species)
  9. 559819Replication protein A 32 KDa subunit (RPA32) fragment [50269] (1 species)
  10. 559825Replication protein A 70 KDa subunit (RPA70) [50267] (1 species)
    duplication: consists of three domains of this fold; contains zinc-finger insert in the C-terminal domain, residues 479-511
  11. 559836ssDNA-binding protein [50264] (4 species)
    1. 559837Species Deinococcus radiodurans [TaxId:1299] [110194] (1 PDB entry)
    2. 559839Species Escherichia coli [TaxId:562] [50266] (5 PDB entries)
    3. 559860Species Human (Homo sapiens), mitochondria [TaxId:9606] [50265] (2 PDB entries)
    4. 559865Species Mycobacterium tuberculosis [TaxId:1773] [101760] (4 PDB entries)
  12. 559878Telomere end binding protein alpha subunit [50273] (1 species)
    duplication: consists of three domains of this fold

More info for Family b.40.4.3: Single strand DNA-binding domain, SSB

Timeline for Family b.40.4.3: Single strand DNA-binding domain, SSB: