Lineage for Protein: Aspartyl-tRNA synthetase (AspRS)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2049950Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2051128Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families) (S)
  5. 2051129Family b.40.4.1: Anticodon-binding domain [50250] (2 protein domains)
    barrel, closed; n=5, S=10
  6. 2051130Protein Aspartyl-tRNA synthetase (AspRS) [50251] (5 species)
    this is N-terminal domain in prokaryotic enzymes and the first "visible" domain in eukaryotic enzymes

Species:

  1. 2051131Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [50252] (3 PDB entries)
    1. Domains for 1asy:
      1. 2051135Domain d1asya1: 1asy A:68-204 [25242]
        Other proteins in same PDB: d1asya2, d1asyb2
        protein/RNA complex
      2. 2051136Domain d1asyb1: 1asy B:68-204 [25243]
        Other proteins in same PDB: d1asya2, d1asyb2
        protein/RNA complex
    2. Domains for 1asz:
      1. 2051133Domain d1asza1: 1asz A:68-204 [25240]
        Other proteins in same PDB: d1asza2, d1aszb2
        protein/RNA complex; complexed with atp
      2. 2051134Domain d1aszb1: 1asz B:68-204 [25241]
        Other proteins in same PDB: d1asza2, d1aszb2
        protein/RNA complex; complexed with atp
    3. Domain for 1eov:
  2. 2051137Escherichia coli [TaxId:562] [50254] (3 PDB entries)
    1. Domain for 1c0a:
    2. Domains for 1eqr:
      1. 2051141Domain d1eqra1: 1eqr A:1-106 [25247]
        Other proteins in same PDB: d1eqra2, d1eqra3, d1eqrb2, d1eqrb3, d1eqrc2, d1eqrc3
        complexed with mg
      2. 2051142Domain d1eqrb1: 1eqr B:1-106 [25248]
        Other proteins in same PDB: d1eqra2, d1eqra3, d1eqrb2, d1eqrb3, d1eqrc2, d1eqrc3
        complexed with mg
      3. 2051143Domain d1eqrc1: 1eqr C:1-106 [25249]
        Other proteins in same PDB: d1eqra2, d1eqra3, d1eqrb2, d1eqrb3, d1eqrc2, d1eqrc3
        complexed with mg
    3. Domains for 1il2:
      1. 2051139Domain d1il2a1: 1il2 A:1-106 [66193]
        Other proteins in same PDB: d1il2a2, d1il2a3, d1il2b2, d1il2b3
        protein/RNA complex; complexed with amo, so4
      2. 2051140Domain d1il2b1: 1il2 B:1001-1106 [66196]
        Other proteins in same PDB: d1il2a2, d1il2a3, d1il2b2, d1il2b3
        protein/RNA complex; complexed with amo, so4
  3. 2051144Pyrococcus kodakaraensis [TaxId:311400] [50253] (1 PDB entry)
  4. 2051147Thermus thermophilus, AspRS-1 [TaxId:274] [50255] (3 PDB entries)
    1. Domains for 1efw:
      1. 2051152Domain d1efwa1: 1efw A:1-104 [25252]
        Other proteins in same PDB: d1efwa2, d1efwa3, d1efwb2, d1efwb3
        protein/RNA complex
      2. 2051153Domain d1efwb1: 1efw B:1-104 [25253]
        Other proteins in same PDB: d1efwa2, d1efwa3, d1efwb2, d1efwb3
        protein/RNA complex
    2. Domains for 1g51:
      1. 2051150Domain d1g51a1: 1g51 A:1-104 [25250]
        Other proteins in same PDB: d1g51a2, d1g51a3, d1g51b2, d1g51b3
        complexed with amo, amp, so4
      2. 2051151Domain d1g51b1: 1g51 B:1001-1104 [25251]
        Other proteins in same PDB: d1g51a2, d1g51a3, d1g51b2, d1g51b3
        complexed with amo, amp, so4
    3. Domains for 1l0w:
      1. 2051148Domain d1l0wa1: 1l0w A:1-104 [73426]
        Other proteins in same PDB: d1l0wa2, d1l0wa3, d1l0wb2, d1l0wb3
      2. 2051149Domain d1l0wb1: 1l0w B:1001-1104 [73429]
        Other proteins in same PDB: d1l0wa2, d1l0wa3, d1l0wb2, d1l0wb3
  5. 2051154Thermus thermophilus, AspRS-2 [TaxId:274] [89323] (1 PDB entry)
    non-discriminating and archaeal-type enzyme

More info for Protein Aspartyl-tRNA synthetase (AspRS) from b.40.4.1: Anticodon-binding domain

Timeline for Protein Aspartyl-tRNA synthetase (AspRS) from b.40.4.1: Anticodon-binding domain: