SCOPe 2.08: Species: Escherichia coli [TaxId: 562]

Lineage for Species: Escherichia coli [TaxId: 562]

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.40: OB-fold [50198] (17 superfamilies)
barrel, closed or partly opened n=5, S=10 or S=8; greek-key
Superfamily b.40.2: Bacterial enterotoxins [50203] (3 families)
Family b.40.2.1: Bacterial AB5 toxins, B-subunits [50204] (7 proteins)
Protein Verotoxin-1/shiga-toxin, B-pentamer [50210] (4 species)
phage-borne toxin; bacteriophages H30 and H19B
Species Escherichia coli [TaxId:562] [50211] (17 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

Domain(s) for 1bos:
1. Domain d1bosa_: 1bos A: [25075]
  complexed with bgc, gal, gla
2. Domain d1bosb_: 1bos B: [25076]
  complexed with bgc, gal, gla
3. Domain d1bosc_: 1bos C: [25077]
  complexed with bgc, gal, gla
4. Domain d1bosd_: 1bos D: [25078]
  complexed with bgc, gal, gla
5. Domain d1bose_: 1bos E: [25079]
  complexed with bgc, gal, gla
6. Domain d1bosf_: 1bos F: [25080]
  complexed with bgc, gal, gla
7. Domain d1bosg_: 1bos G: [25081]
  complexed with bgc, gal, gla
8. Domain d1bosh_: 1bos H: [25082]
  complexed with bgc, gal, gla
9. Domain d1bosi_: 1bos I: [25083]
  complexed with bgc, gal, gla
10. Domain d1bosj_: 1bos J: [25084]
  complexed with bgc, gal, gla
11. Domain d1bosk_: 1bos K: [25085]
  complexed with bgc, gal, gla
12. Domain d1bosl_: 1bos L: [25086]
  complexed with bgc, gal, gla
13. Domain d1bosm_: 1bos M: [25087]
  complexed with bgc, gal, gla
14. Domain d1bosn_: 1bos N: [25088]
  complexed with bgc, gal, gla
15. Domain d1boso_: 1bos O: [25089]
  complexed with bgc, gal, gla
16. Domain d1bosp_: 1bos P: [25090]
  complexed with bgc, gal, gla
17. Domain d1bosq_: 1bos Q: [25091]
  complexed with bgc, gal, gla
18. Domain d1bosr_: 1bos R: [25092]
  complexed with bgc, gal, gla
19. Domain d1boss_: 1bos S: [25093]
  complexed with bgc, gal, gla
20. Domain d1bost_: 1bos T: [25094]
  complexed with bgc, gal, gla
Domain(s) for 1bov:
1. Domain d1bova_: 1bov A: [302241]
  automated match to d1bosa_
  complexed with zn
2. Domain d1bovb_: 1bov B: [302242]
  automated match to d1bosa_
  complexed with zn
3. Domain d1bovc_: 1bov C: [302243]
  automated match to d1bosa_
  complexed with zn
4. Domain d1bovd_: 1bov D: [302244]
  automated match to d1bosa_
  complexed with zn
5. Domain d1bove_: 1bov E: [302245]
  automated match to d1bosa_
  complexed with zn
Domain(s) for 1c48:
1. Domain d1c48a_: 1c48 A: [25015]
2. Domain d1c48b_: 1c48 B: [25016]
3. Domain d1c48c_: 1c48 C: [25017]
4. Domain d1c48d_: 1c48 D: [25018]
5. Domain d1c48e_: 1c48 E: [25019]
Domain(s) for 1c4q:
1. Domain d1c4qa_: 1c4q A: [25010]
2. Domain d1c4qb_: 1c4q B: [25011]
3. Domain d1c4qc_: 1c4q C: [25012]
4. Domain d1c4qd_: 1c4q D: [25013]
5. Domain d1c4qe_: 1c4q E: [25014]
Domain(s) for 1cqf:
1. Domain d1cqfa_: 1cqf A: [25055]
  complex with Gb3 trisaccharide
2. Domain d1cqfb_: 1cqf B: [25056]
  complex with Gb3 trisaccharide
3. Domain d1cqfc_: 1cqf C: [25057]
  complex with Gb3 trisaccharide
4. Domain d1cqfd_: 1cqf D: [25058]
  complex with Gb3 trisaccharide
5. Domain d1cqfe_: 1cqf E: [25059]
  complex with Gb3 trisaccharide
Domain(s) for 1czg:
1. Domain d1czga_: 1czg A: [25095]
  mutant
2. Domain d1czgb_: 1czg B: [25096]
  mutant
3. Domain d1czgc_: 1czg C: [25097]
  mutant
4. Domain d1czgd_: 1czg D: [25098]
  mutant
5. Domain d1czge_: 1czg E: [25099]
  mutant
Domain(s) for 1czw:
1. Domain d1czwa_: 1czw A: [25060]
  mutant
2. Domain d1czwb_: 1czw B: [25061]
  mutant
3. Domain d1czwc_: 1czw C: [25062]
  mutant
4. Domain d1czwd_: 1czw D: [25063]
  mutant
5. Domain d1czwe_: 1czw E: [25064]
  mutant
6. Domain d1czwf_: 1czw F: [25065]
  mutant
7. Domain d1czwg_: 1czw G: [25066]
  mutant
8. Domain d1czwh_: 1czw H: [25067]
  mutant
9. Domain d1czwi_: 1czw I: [25068]
  mutant
10. Domain d1czwj_: 1czw J: [25069]
  mutant
Domain(s) for 1d1i:
1. Domain d1d1ia_: 1d1i A: [25020]
2. Domain d1d1ib_: 1d1i B: [25021]
3. Domain d1d1ic_: 1d1i C: [25022]
4. Domain d1d1id_: 1d1i D: [25023]
5. Domain d1d1ie_: 1d1i E: [25024]
Domain(s) for 1d1k:
1. Domain d1d1ka_: 1d1k A: [25030]
2. Domain d1d1kb_: 1d1k B: [25031]
3. Domain d1d1kc_: 1d1k C: [25032]
4. Domain d1d1kd_: 1d1k D: [25033]
5. Domain d1d1ke_: 1d1k E: [25034]
Domain(s) for 1qoh:
1. Domain d1qoha_: 1qoh A: [25035]
  A mutant shiga-like toxin IIe
  mutant
2. Domain d1qohb_: 1qoh B: [25036]
  A mutant shiga-like toxin IIe
  mutant
3. Domain d1qohc_: 1qoh C: [25037]
  A mutant shiga-like toxin IIe
  mutant
4. Domain d1qohd_: 1qoh D: [25038]
  A mutant shiga-like toxin IIe
  mutant
5. Domain d1qohe_: 1qoh E: [25039]
  A mutant shiga-like toxin IIe
  mutant
6. Domain d1qohf_: 1qoh F: [25040]
  A mutant shiga-like toxin IIe
  mutant
7. Domain d1qohg_: 1qoh G: [25041]
  A mutant shiga-like toxin IIe
  mutant
8. Domain d1qohh_: 1qoh H: [25042]
  A mutant shiga-like toxin IIe
  mutant
9. Domain d1qohi_: 1qoh I: [25043]
  A mutant shiga-like toxin IIe
  mutant
10. Domain d1qohj_: 1qoh J: [25044]
  A mutant shiga-like toxin IIe
  mutant
11. Domain d1qohk_: 1qoh K: [25045]
  A mutant shiga-like toxin IIe
  mutant
12. Domain d1qohl_: 1qoh L: [25046]
  A mutant shiga-like toxin IIe
  mutant
13. Domain d1qohm_: 1qoh M: [25047]
  A mutant shiga-like toxin IIe
  mutant
14. Domain d1qohn_: 1qoh N: [25048]
  A mutant shiga-like toxin IIe
  mutant
15. Domain d1qoho_: 1qoh O: [25049]
  A mutant shiga-like toxin IIe
  mutant
16. Domain d1qohp_: 1qoh P: [25050]
  A mutant shiga-like toxin IIe
  mutant
17. Domain d1qohq_: 1qoh Q: [25051]
  A mutant shiga-like toxin IIe
  mutant
18. Domain d1qohr_: 1qoh R: [25052]
  A mutant shiga-like toxin IIe
  mutant
19. Domain d1qohs_: 1qoh S: [25053]
  A mutant shiga-like toxin IIe
  mutant
20. Domain d1qoht_: 1qoh T: [25054]
  A mutant shiga-like toxin IIe
  mutant
Domain(s) for 2bos:
1. Domain d2bosa_: 2bos A: [25025]
  complexed with nbu; mutant
2. Domain d2bosb_: 2bos B: [25026]
  complexed with nbu; mutant
3. Domain d2bosc_: 2bos C: [25027]
  complexed with nbu; mutant
4. Domain d2bosd_: 2bos D: [25028]
  complexed with nbu; mutant
5. Domain d2bose_: 2bos E: [25029]
  complexed with nbu; mutant
Domain(s) for 2c5c:
1. Domain d2c5ca_: 2c5c A: [129902]
  automated match to d1bosa_
  complexed with gla, s10, so4
2. Domain d2c5cb_: 2c5c B: [129903]
  automated match to d1bosa_
  complexed with gla, s10, so4
3. Domain d2c5cc_: 2c5c C: [129904]
  automated match to d1bosa_
  complexed with gla, s10, so4
4. Domain d2c5cd_: 2c5c D: [129905]
  automated match to d1bosa_
  complexed with gla, s10, so4
5. Domain d2c5ce_: 2c5c E: [129906]
  automated match to d1bosa_
  complexed with gla, s10, so4
6. Domain d2c5cf_: 2c5c F: [129907]
  automated match to d1bosa_
  complexed with gla, s10, so4
7. Domain d2c5cg_: 2c5c G: [129908]
  automated match to d1bosa_
  complexed with gla, s10, so4
8. Domain d2c5ch_: 2c5c H: [129909]
  automated match to d1bosa_
  complexed with gla, s10, so4
9. Domain d2c5ci_: 2c5c I: [129910]
  automated match to d1bosa_
  complexed with gla, s10, so4
10. Domain d2c5cj_: 2c5c J: [129911]
  automated match to d1bosa_
  complexed with gla, s10, so4
Domain(s) for 2xsc:
1. Domain d2xsca_: 2xsc A: [170347]
  automated match to d1bosa_
  complexed with zn
2. Domain d2xscb_: 2xsc B: [170348]
  automated match to d1bosa_
  complexed with zn
3. Domain d2xscc_: 2xsc C: [170349]
  automated match to d1bosa_
  complexed with zn
4. Domain d2xscd_: 2xsc D: [170350]
  automated match to d1bosa_
  complexed with zn
5. Domain d2xsce_: 2xsc E: [170351]
  automated match to d1bosa_
  complexed with zn
Domain(s) for 4m1u:
1. Domain d4m1ub_: 4m1u B: [229130]
  Other proteins in same PDB: d4m1ua_
  automated match to d1r4pb_
  complexed with 1ps
2. Domain d4m1uc_: 4m1u C: [229134]
  Other proteins in same PDB: d4m1ua_
  automated match to d1r4pb_
  complexed with 1ps
3. Domain d4m1ud_: 4m1u D: [229133]
  Other proteins in same PDB: d4m1ua_
  automated match to d1r4pb_
  complexed with 1ps
4. Domain d4m1ue_: 4m1u E: [229132]
  Other proteins in same PDB: d4m1ua_
  automated match to d1r4pb_
  complexed with 1ps
5. Domain d4m1uf_: 4m1u F: [229131]
  Other proteins in same PDB: d4m1ua_
  automated match to d1r4pb_
  complexed with 1ps
Domain(s) for 4ull:
- Domain d4ulla_: 4ull A: [25100]
Domain(s) for 7d6q:
1. Domain d7d6qb_: 7d6q B: [403200]
  Other proteins in same PDB: d7d6qa_
  automated match to d1r4pb_
  complexed with 1ps
2. Domain d7d6qc_: 7d6q C: [403203]
  Other proteins in same PDB: d7d6qa_
  automated match to d1r4pb_
  complexed with 1ps
3. Domain d7d6qd_: 7d6q D: [403205]
  Other proteins in same PDB: d7d6qa_
  automated match to d1r4pb_
  complexed with 1ps
4. Domain d7d6qe_: 7d6q E: [403207]
  Other proteins in same PDB: d7d6qa_
  automated match to d1r4pb_
  complexed with 1ps
5. Domain d7d6qf_: 7d6q F: [403217]
  Other proteins in same PDB: d7d6qa_
  automated match to d1r4pb_
  complexed with 1ps
Domain(s) for 7d6r:
1. Domain d7d6rb_: 7d6r B: [403221]
  Other proteins in same PDB: d7d6ra_
  automated match to d1r4pb_
  complexed with 1ps, nh2
2. Domain d7d6rc_: 7d6r C: [403216]
  Other proteins in same PDB: d7d6ra_
  automated match to d1r4pb_
  complexed with 1ps, nh2
3. Domain d7d6rd_: 7d6r D: [403210]
  Other proteins in same PDB: d7d6ra_
  automated match to d1r4pb_
  complexed with 1ps, nh2
4. Domain d7d6re_: 7d6r E: [403218]
  Other proteins in same PDB: d7d6ra_
  automated match to d1r4pb_
  complexed with 1ps, nh2
5. Domain d7d6rf_: 7d6r F: [403224]
  Other proteins in same PDB: d7d6ra_
  automated match to d1r4pb_
  complexed with 1ps, nh2

More info for Species Escherichia coli [TaxId:562] from b.40.2.1 Verotoxin-1/shiga-toxin, B-pentamer

Timeline for Species Escherichia coli [TaxId:562] from b.40.2.1 Verotoxin-1/shiga-toxin, B-pentamer:

Species Escherichia coli [TaxId:562] from b.40.2.1 Verotoxin-1/shiga-toxin, B-pentamer first appeared (with stable ids) in SCOP 1.55
Species Escherichia coli [TaxId:562] from b.40.2.1 Verotoxin-1/shiga-toxin, B-pentamer appears in SCOPe 2.07