Lineage for Protein: Verotoxin-1/shiga-toxin, B-pentamer

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 373898Fold b.40: OB-fold [50198] (10 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 373966Superfamily b.40.2: Bacterial enterotoxins [50203] (2 families) (S)
  5. 373967Family b.40.2.1: Bacterial AB5 toxins, B-subunits [50204] (6 proteins)
  6. 374244Protein Verotoxin-1/shiga-toxin, B-pentamer [50210] (3 species)
    phage-borne toxin; bacteriophages H30 and H19B

Species:

  1. 374245Escherichia coli [TaxId:562] [50211] (12 PDB entries)
    1. Domains for 1bos:
      1. 374291Domain d1bosa_: 1bos A: [25075]
      2. 374292Domain d1bosb_: 1bos B: [25076]
      3. 374293Domain d1bosc_: 1bos C: [25077]
      4. 374294Domain d1bosd_: 1bos D: [25078]
      5. 374295Domain d1bose_: 1bos E: [25079]
      6. 374296Domain d1bosf_: 1bos F: [25080]
      7. 374297Domain d1bosg_: 1bos G: [25081]
      8. 374298Domain d1bosh_: 1bos H: [25082]
      9. 374299Domain d1bosi_: 1bos I: [25083]
      10. 374300Domain d1bosj_: 1bos J: [25084]
      11. 374301Domain d1bosk_: 1bos K: [25085]
      12. 374302Domain d1bosl_: 1bos L: [25086]
      13. 374303Domain d1bosm_: 1bos M: [25087]
      14. 374304Domain d1bosn_: 1bos N: [25088]
      15. 374305Domain d1boso_: 1bos O: [25089]
      16. 374306Domain d1bosp_: 1bos P: [25090]
      17. 374307Domain d1bosq_: 1bos Q: [25091]
      18. 374308Domain d1bosr_: 1bos R: [25092]
      19. 374309Domain d1boss_: 1bos S: [25093]
      20. 374310Domain d1bost_: 1bos T: [25094]
        complexed with gal, glc
    2. Domains for 1bov:
      1. 374276Domain d1bova_: 1bov A: [25070]
      2. 374277Domain d1bovb_: 1bov B: [25071]
      3. 374278Domain d1bovc_: 1bov C: [25072]
      4. 374279Domain d1bovd_: 1bov D: [25073]
      5. 374280Domain d1bove_: 1bov E: [25074]
        complexed with zn
    3. Domains for 1c48:
      1. 374251Domain d1c48a_: 1c48 A: [25015]
      2. 374252Domain d1c48b_: 1c48 B: [25016]
      3. 374253Domain d1c48c_: 1c48 C: [25017]
      4. 374254Domain d1c48d_: 1c48 D: [25018]
      5. 374255Domain d1c48e_: 1c48 E: [25019]
        mutant
    4. Domains for 1c4q:
      1. 374246Domain d1c4qa_: 1c4q A: [25010]
      2. 374247Domain d1c4qb_: 1c4q B: [25011]
      3. 374248Domain d1c4qc_: 1c4q C: [25012]
      4. 374249Domain d1c4qd_: 1c4q D: [25013]
      5. 374250Domain d1c4qe_: 1c4q E: [25014]
        complexed with gal, glc; mutant
    5. Domains for 1cqf:
      1. 374271Domain d1cqfa_: 1cqf A: [25055]
      2. 374272Domain d1cqfb_: 1cqf B: [25056]
      3. 374273Domain d1cqfc_: 1cqf C: [25057]
      4. 374274Domain d1cqfd_: 1cqf D: [25058]
      5. 374275Domain d1cqfe_: 1cqf E: [25059]
        complex with Gb3 trisaccharide
        complexed with gal, glc; mutant
    6. Domains for 1czg:
      1. 374311Domain d1czga_: 1czg A: [25095]
      2. 374312Domain d1czgb_: 1czg B: [25096]
      3. 374313Domain d1czgc_: 1czg C: [25097]
      4. 374314Domain d1czgd_: 1czg D: [25098]
      5. 374315Domain d1czge_: 1czg E: [25099]
        mutant
    7. Domains for 1czw:
      1. 374281Domain d1czwa_: 1czw A: [25060]
      2. 374282Domain d1czwb_: 1czw B: [25061]
      3. 374283Domain d1czwc_: 1czw C: [25062]
      4. 374284Domain d1czwd_: 1czw D: [25063]
      5. 374285Domain d1czwe_: 1czw E: [25064]
      6. 374286Domain d1czwf_: 1czw F: [25065]
      7. 374287Domain d1czwg_: 1czw G: [25066]
      8. 374288Domain d1czwh_: 1czw H: [25067]
      9. 374289Domain d1czwi_: 1czw I: [25068]
      10. 374290Domain d1czwj_: 1czw J: [25069]
        mutant
    8. Domains for 1d1i:
      1. 374256Domain d1d1ia_: 1d1i A: [25020]
      2. 374257Domain d1d1ib_: 1d1i B: [25021]
      3. 374258Domain d1d1ic_: 1d1i C: [25022]
      4. 374259Domain d1d1id_: 1d1i D: [25023]
      5. 374260Domain d1d1ie_: 1d1i E: [25024]
        complexed with gal, glc; mutant
    9. Domains for 1d1k:
      1. 374266Domain d1d1ka_: 1d1k A: [25030]
      2. 374267Domain d1d1kb_: 1d1k B: [25031]
      3. 374268Domain d1d1kc_: 1d1k C: [25032]
      4. 374269Domain d1d1kd_: 1d1k D: [25033]
      5. 374270Domain d1d1ke_: 1d1k E: [25034]
        complexed with gal, glc; mutant
    10. Domains for 1qoh:
      1. 374317Domain d1qoha_: 1qoh A: [25035]
      2. 374318Domain d1qohb_: 1qoh B: [25036]
      3. 374319Domain d1qohc_: 1qoh C: [25037]
      4. 374320Domain d1qohd_: 1qoh D: [25038]
      5. 374321Domain d1qohe_: 1qoh E: [25039]
      6. 374322Domain d1qohf_: 1qoh F: [25040]
      7. 374323Domain d1qohg_: 1qoh G: [25041]
      8. 374324Domain d1qohh_: 1qoh H: [25042]
      9. 374325Domain d1qohi_: 1qoh I: [25043]
      10. 374326Domain d1qohj_: 1qoh J: [25044]
      11. 374327Domain d1qohk_: 1qoh K: [25045]
      12. 374328Domain d1qohl_: 1qoh L: [25046]
      13. 374329Domain d1qohm_: 1qoh M: [25047]
      14. 374330Domain d1qohn_: 1qoh N: [25048]
      15. 374331Domain d1qoho_: 1qoh O: [25049]
      16. 374332Domain d1qohp_: 1qoh P: [25050]
      17. 374333Domain d1qohq_: 1qoh Q: [25051]
      18. 374334Domain d1qohr_: 1qoh R: [25052]
      19. 374335Domain d1qohs_: 1qoh S: [25053]
      20. 374336Domain d1qoht_: 1qoh T: [25054]
        A mutant shiga-like toxin IIe
    11. Domains for 2bos:
      1. 374261Domain d2bosa_: 2bos A: [25025]
      2. 374262Domain d2bosb_: 2bos B: [25026]
      3. 374263Domain d2bosc_: 2bos C: [25027]
      4. 374264Domain d2bosd_: 2bos D: [25028]
      5. 374265Domain d2bose_: 2bos E: [25029]
        complexed with but, gal, glc; mutant
    12. Domain for 4ull:
  2. 374337Shigella dysenteriae, toxin I [TaxId:622] [50212] (3 PDB entries)
    identical sequence with verotoxin-1 B
    1. Domains for 1dm0:
      1. 374353Domain d1dm0b_: 1dm0 B: [25106]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
      2. 374354Domain d1dm0c_: 1dm0 C: [25107]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
      3. 374355Domain d1dm0d_: 1dm0 D: [25108]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
      4. 374356Domain d1dm0e_: 1dm0 E: [25109]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
      5. 374357Domain d1dm0f_: 1dm0 F: [25110]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
      6. 374358Domain d1dm0g_: 1dm0 G: [25111]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
      7. 374359Domain d1dm0h_: 1dm0 H: [25112]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
      8. 374360Domain d1dm0i_: 1dm0 I: [25113]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
      9. 374361Domain d1dm0j_: 1dm0 J: [25114]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
      10. 374362Domain d1dm0k_: 1dm0 K: [25115]
        Other proteins in same PDB: d1dm0a_, d1dm0l_
    2. Domains for 1qnu:
      1. 374338Domain d1qnua_: 1qnu A: [25101]
      2. 374339Domain d1qnub_: 1qnu B: [25102]
      3. 374340Domain d1qnuc_: 1qnu C: [25103]
      4. 374341Domain d1qnud_: 1qnu D: [25104]
      5. 374342Domain d1qnue_: 1qnu E: [25105]
        complexed with emb, gal, glc, mec
    3. Domains for 1r4q:
      1. 374343Domain d1r4qb_: 1r4q B: [97032]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
      2. 374344Domain d1r4qc_: 1r4q C: [97033]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
      3. 374345Domain d1r4qd_: 1r4q D: [97034]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
      4. 374346Domain d1r4qe_: 1r4q E: [97035]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
      5. 374347Domain d1r4qf_: 1r4q F: [97036]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
      6. 374348Domain d1r4qg_: 1r4q G: [97037]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
      7. 374349Domain d1r4qh_: 1r4q H: [97038]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
      8. 374350Domain d1r4qi_: 1r4q I: [97039]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
      9. 374351Domain d1r4qj_: 1r4q J: [97040]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
      10. 374352Domain d1r4qk_: 1r4q K: [97041]
        Other proteins in same PDB: d1r4qa_, d1r4ql_
  3. 374363Shigella dysenteriae, toxin II [TaxId:622] [101755] (1 PDB entry)

More info for Protein Verotoxin-1/shiga-toxin, B-pentamer from b.40.2.1: Bacterial AB5 toxins, B-subunits

Timeline for Protein Verotoxin-1/shiga-toxin, B-pentamer from b.40.2.1: Bacterial AB5 toxins, B-subunits: