Lineage for Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 666911Fold b.38: Sm-like fold [50181] (3 superfamilies)
    core: barrel, open; n*=4, S*=8; meander; SH3-like topology
  4. 666912Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (5 families) (S)
  5. 666913Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (8 proteins)
    forms homo and heteroheptameric ring structures

Proteins:

  1. 666914Archaeal homoheptameric Sm protein [63758] (6 species)
    1. 666915Species Archaeon Archaeoglobus fulgidus, AF-Sm1 [TaxId:2234] [63761] (2 PDB entries)
    2. 666958Species Archaeon Archaeoglobus fulgidus, AF-Sm2 [TaxId:2234] [74938] (1 PDB entry)
    3. 666960Species Archaeon Methanobacterium thermoautotrophicum [TaxId:145262] [63759] (5 PDB entries)
      MTH649, smap1
    4. 667010Species Archaeon Pyrobaculum aerophilum [TaxId:13773] [63760] (2 PDB entries)
      smap1
    5. 667025Species Archaeon Pyrococcus abyssi [TaxId:29292] [82089] (2 PDB entries)
    6. 667068Species Sulfolobus solfataricus [TaxId:2287] [141290] (1 PDB entry)
      SnRNP-2
  2. 667083B core SNRNP protein [50190] (1 species)
  3. 667091D1 core SNRNP protein [50184] (1 species)
  4. 667094D2 core SNRNP protein [50186] (1 species)
  5. 667097D3 core SNRNP protein [50188] (1 species)
  6. 667105Sm-Like archaeal protein Smap3 [89317] (1 species)
    contains additional C-terminal alpha+beta domain
  7. 667135Small nuclear ribonucleoprotein F, Smf [82087] (1 species)
  8. 667158U6 snRNA-associated sm-like protein LSM5 [141291] (1 species)

More info for Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP

Timeline for Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP: