Lineage for Family b.36.1.1: PDZ domain

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 666573Fold b.36: PDZ domain-like [50155] (1 superfamily)
    contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix
  4. 666574Superfamily b.36.1: PDZ domain-like [50156] (4 families) (S)
    peptide-binding domain
  5. 666575Family b.36.1.1: PDZ domain [50157] (46 proteins)
    Pfam PF00595

Proteins:

  1. 666576Afadin [141269] (1 species)
  2. 666581Alpha-actinin-2 associated LIM protein [110178] (1 species)
  3. 666584Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) [141282] (1 species)
  4. 666593Cask/Lin-2 [50160] (1 species)
  5. 666597Channel associated protein of synapse-110 [141273] (1 species)
    Discs large homolog 2, PSD-93
  6. 666600Discs large 5 protein KIAA0583 [101725] (1 species)
  7. 666603Discs large protein homolog [50158] (1 species)
  8. 666609DNA Regulating synaptic membrane exocytosis protein 2, RIMS2 [117176] (1 species)
  9. 666612Enigma homolog ENH [117174] (1 species)
  10. 666615Erbin [82085] (1 species)
  11. 666622Glutamate receptor interacting protein [82083] (2 species)
    1. 666623Species Mouse (Mus musculus) [TaxId:10090] [110177] (1 PDB entry)
    2. 666625Species Rat (Rattus norvegicus) [TaxId:10116] [82084] (3 PDB entries)
  12. 666630Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) [110180] (1 species)
  13. 666634Glutamate receptor-interacting protein 1, GRIP1 [101717] (1 species)
  14. 666639GTPase-binding domain of the cell polarity protein par6 (Par-6B) [89315] (2 species)
    1. 666640Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [101716] (3 PDB entries)
    2. 666644Species Mouse (Mus musculus) [TaxId:10090] [89316] (1 PDB entry)
  15. 666647Harmonin [110182] (2 species)
    1. 666648Species Human (Homo sapiens) [TaxId:9606] [141263] (1 PDB entry)
    2. 666650Species Mouse (Mus musculus) [TaxId:10090] [110183] (1 PDB entry)
  16. 666652hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik) [117184] (1 species)
  17. 666655Hypothetical protein KIAA0559 [101727] (1 species)
  18. 666658Hypothetical protein KIAA1095 [101723] (1 species)
  19. 666662Hypothetical protein KIAA1849 [101729] (1 species)
  20. 666665Inad [63756] (1 species)
  21. 666669KIAA1526 protein [101721] (1 species)
  22. 666674Maguk p55 subfamily member 5 [141275] (1 species)
  23. 666677Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) [101719] (1 species)
  24. 666684Multiple PDZ domain protein [141267] (1 species)
  25. 666690Na+/H+ exchanger regulatory factor, NHERF [63754] (1 species)
  26. 666696Neurabin-i [141277] (1 species)
  27. 666699Neuronal nitric oxide synthase, NNOS [50166] (1 species)
  28. 666704Partitioning-defective 3-like protein, PAR3-L (RIKEN cDNA 2810455b10) [117178] (1 species)
  29. 666707PDZ domain containing protein 11, Pdzk11 [117182] (1 species)
  30. 666710PDZ-LIM protein mystique [110186] (1 species)
  31. 666713Phosphatase hPTP1e [50168] (2 species)
    1. 666714Species Human (Homo sapiens) [TaxId:9606] [50169] (3 PDB entries)
    2. 666718Species Mouse (Mus musculus) [TaxId:10090] [74930] (3 PDB entries)
  32. 666722Presynaptic protein sap97 [141284] (1 species)
    PSD-95 homologue
  33. 666725Regulating synaptic membrane exocytosis protein 1, RIMS1 [141279] (2 species)
    1. 666726Species Human (Homo sapiens) [TaxId:9606] [141281] (1 PDB entry)
    2. 666728Species Rat (Rattus norvegicus) [TaxId:10116] [141280] (1 PDB entry)
  34. 666730Regulator of G-protein signaling 3, RGS3 [117180] (2 species)
    1. 666731Species Human (Homo sapiens) [TaxId:9606] [141264] (1 PDB entry)
    2. 666734Species Mouse (Mus musculus) [TaxId:10090] [117181] (1 PDB entry)
  35. 666736Rhophilin-2 [110184] (1 species)
  36. 666739Scribble (KIAA0147) [101731] (1 species)
  37. 666744Segment polarity protein dishevelled homolog Dvl-2 [89313] (2 species)
    1. 666745Species African clawed frog (Xenopus laevis) [TaxId:8355] [89314] (2 PDB entries)
    2. 666753Species Mouse (Mus musculus) [TaxId:10090] [101715] (1 PDB entry)
  38. 666755Shank1, PDZ domain [101733] (1 species)
    SH3 and multiple ankyrin repeat domains protein 1
  39. 666761Synapse-associated protein 102 [101713] (1 species)
  40. 666765Synaptic protein PSD-95 [50162] (2 species)
    Synonym: synapse associated protein 90, sap90
    duplication: contains three PDZ domains
    1. 666766Species Human (Homo sapiens) [TaxId:9606] [74932] (1 PDB entry)
    2. 666768Species Rat (Rattus norvegicus) [TaxId:10116] [50163] (9 PDB entries)
  41. 666778Syntaxin binding protein 4 [141271] (1 species)
  42. 666781Syntenin 1 [89311] (1 species)
  43. 666816Syntrophin [50164] (1 species)
  44. 666821Tight junction protein ZO-2, Tjp2 [141265] (1 species)
  45. 666824Tyrosine-protein phosphatase non-receptor type 4, PTPN4 [141286] (1 species)
  46. 666827Zasp (Cypher, Oracle 1) [101735] (2 species)
    1. 666828Species Human (Homo sapiens) [TaxId:9606] [101736] (1 PDB entry)
    2. 666830Species Mouse (Mus musculus) [TaxId:10090] [117173] (1 PDB entry)

More info for Family b.36.1.1: PDZ domain

Timeline for Family b.36.1.1: PDZ domain: