Lineage for Protein: DNA-binding domain of retroviral integrase

  1. Root: SCOP 1.55
  2. 6992Class b: All beta proteins [48724] (93 folds)
  3. 13047Fold b.34: SH3-like barrel [50036] (7 superfamilies)
  4. 13313Superfamily b.34.7: DNA-binding domain of retroviral integrase [50122] (1 family) (S)
  5. 13314Family b.34.7.1: DNA-binding domain of retroviral integrase [50123] (1 protein)
  6. 13315Protein DNA-binding domain of retroviral integrase [50124] (3 species)

Species:

  1. 13316Human immunodeficiency virus type 1 [TaxId:11676] [50125] (4 PDB entries)
    1. Domains for 1ex4:
      1. 13317Domain d1ex4a1: 1ex4 A:223-270 [24627]
        Other proteins in same PDB: d1ex4a2, d1ex4b2
      2. 13318Domain d1ex4b1: 1ex4 B:223-270 [24628]
        Other proteins in same PDB: d1ex4a2, d1ex4b2
    2. Domains for 1ihv:
      1. 13319Domain d1ihva_: 1ihv A: [24629]
      2. 13320Domain d1ihvb_: 1ihv B: [24630]
    3. Domains for 1ihw:
      1. 13321Domain d1ihwa_: 1ihw A: [24631]
      2. 13322Domain d1ihwb_: 1ihw B: [24632]
    4. Domains for 1qmc:
      1. 13323Domain d1qmca_: 1qmc A: [24633]
      2. 13324Domain d1qmcb_: 1qmc B: [24634]
  2. 13325Rous sarcoma virus (RSV, avian sarcoma virus) [50126] (2 PDB entries)
    1. Domains for 1c0m:
      1. 13326Domain d1c0ma1: 1c0m A:217-269 [24635]
        Other proteins in same PDB: d1c0ma2, d1c0mb2, d1c0mc2, d1c0md2
      2. 13327Domain d1c0mb1: 1c0m B:217-269 [24636]
        Other proteins in same PDB: d1c0ma2, d1c0mb2, d1c0mc2, d1c0md2
      3. 13328Domain d1c0mc1: 1c0m C:217-270 [24637]
        Other proteins in same PDB: d1c0ma2, d1c0mb2, d1c0mc2, d1c0md2
      4. 13329Domain d1c0md1: 1c0m D:217-269 [24638]
        Other proteins in same PDB: d1c0ma2, d1c0mb2, d1c0mc2, d1c0md2
    2. Domains for 1c1a:
      1. 13330Domain d1c1aa1: 1c1a A:217-272 [24639]
        Other proteins in same PDB: d1c1aa2, d1c1ab2
      2. 13331Domain d1c1ab1: 1c1a B:217-268 [24640]
        Other proteins in same PDB: d1c1aa2, d1c1ab2
  3. 13332Simian immunodeficiency virus [50127] (1 PDB entry)

More info for Protein DNA-binding domain of retroviral integrase from b.34.7.1: DNA-binding domain of retroviral integrase

Timeline for Protein DNA-binding domain of retroviral integrase from b.34.7.1: DNA-binding domain of retroviral integrase: