SCOPe 2.03: Protein: CcdB

Lineage for Protein: CcdB

Root: SCOPe 2.03
Class b: All beta proteins [48724] (174 folds)
Fold b.34: SH3-like barrel [50036] (21 superfamilies)
barrel, partly opened; n*=4, S*=8; meander
the last strand is interrupted by a turn of 3-10 helix
Superfamily b.34.6: Cell growth inhibitor/plasmid maintenance toxic component [50118] (3 families)
contains insert beta-sheet subdomain and C-terminal helix
Family b.34.6.1: CcdB [50119] (1 protein)
automatically mapped to Pfam PF01845
Protein CcdB [50120] (2 species)
topoisomerase poison

Species:

Escherichia coli [TaxId:562] [50121] (7 PDB entries)
1. Domains for 1vub:
  1. Domain d1vuba_: 1vub A: [24623]
    complexed with cl
  2. Domain d1vubb_: 1vub B: [24624]
    complexed with cl
  3. Domain d1vubc_: 1vub C: [24625]
    complexed with cl
  4. Domain d1vubd_: 1vub D: [24626]
    complexed with cl
2. Domains for 1x75:
  1. Domain d1x75c_: 1x75 C: [121775]
    Other proteins in same PDB: d1x75a1, d1x75b_
    automated match to d1vuba_
  2. Domain d1x75d_: 1x75 D: [121776]
    Other proteins in same PDB: d1x75a1, d1x75b_
    automated match to d1vuba_
3. Domains for 2vub:
  1. Domain d2vuba_: 2vub A: [24615]
    complexed with cl
  2. Domain d2vubb_: 2vub B: [24616]
    complexed with cl
  3. Domain d2vubc_: 2vub C: [24617]
    complexed with cl
  4. Domain d2vubd_: 2vub D: [24618]
    complexed with cl
  5. Domain d2vube_: 2vub E: [24619]
    complexed with cl
  6. Domain d2vubf_: 2vub F: [24620]
    complexed with cl
  7. Domain d2vubg_: 2vub G: [24621]
    complexed with cl
  8. Domain d2vubh_: 2vub H: [24622]
    complexed with cl
4. Domains for 3g7z:
  1. Domain d3g7za_: 3g7z A: [176412]
    automated match to d1vuba_
  2. Domain d3g7zb_: 3g7z B: [176413]
    automated match to d1vuba_
5. Domains for 3hpw:
  1. Domain d3hpwa_: 3hpw A: [177768]
    automated match to d1vuba_
    complexed with peg, so4
  2. Domain d3hpwb_: 3hpw B: [177769]
    automated match to d1vuba_
    complexed with peg, so4
6. Domain for 3vub:
  - Domain d3vuba_: 3vub A: [24613]
    complexed with cl
7. Domain for 4vub:
  - Domain d4vuba_: 4vub A: [24614]
    complexed with cl
Vibrio fischeri [TaxId:668] [189154] (4 PDB entries)
1. Domain for 3jrz:
  - Domain d3jrza_: 3jrz A: [178745]
    automated match to d1vuba_
2. Domain for 3jsc:
  - Domain d3jsca_: 3jsc A: [178757]
    automated match to d1vuba_
    complexed with so4
3. Domains for 4ely:
  1. Domain d4elyc_: 4ely C: [192389]
    Other proteins in same PDB: d4elya_, d4elyb_
    complexed with cl, so4
  2. Domain d4elyd_: 4ely D: [192390]
    Other proteins in same PDB: d4elya_, d4elyb_
    complexed with cl, so4
4. Domains for 4elz:
  1. Domain d4elzc_: 4elz C: [192391]
    Other proteins in same PDB: d4elza_, d4elzb_
    complexed with gol
  2. Domain d4elzd_: 4elz D: [192392]
    Other proteins in same PDB: d4elza_, d4elzb_
    complexed with gol

More info for Protein CcdB from b.34.6.1: CcdB

Timeline for Protein CcdB from b.34.6.1: CcdB:

Protein CcdB from b.34.6.1: CcdB first appeared (with stable ids) in SCOP 1.55
Protein CcdB from b.34.6.1: CcdB appears in SCOPe 2.02
Protein CcdB from b.34.6.1: CcdB appears in SCOPe 2.04
Protein CcdB from b.34.6.1: CcdB appears in the current release, SCOPe 2.08