SCOPe 2.06: Family b.33.1.1: Rieske iron-sulfur protein (ISP)

Lineage for Family b.33.1.1: Rieske iron-sulfur protein (ISP)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.33: ISP domain [50021] (1 superfamily)
   consists of two all-beta subdomains: conserved small domain has a rubredoxin-like fold; larger domain consists of 6 beta-stands packed in either sandwich of two 3-stranded sheets or closed barrel (n=6; S=8)

4. Superfamily b.33.1: ISP domain [50022] (4 families)

5. Family b.33.1.1: Rieske iron-sulfur protein (ISP) [50023] (9 proteins)

Proteins:

1. Arsenite oxidase Rieske subunit [50029] (1 species)

   • Species Alcaligenes faecalis [TaxId:511] [50030] (2 PDB entries)

2. ISP subunit from chloroplast cytochrome bf complex [50027] (1 species)

   • Species Spinach (Spinacia oleracea) [TaxId:3562] [50028] (1 PDB entry)

3. ISP subunit from the cytochrome b6f complex, soluble domain [101665] (2 species)

   1. Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [101667] (1 PDB entry)

   2. Species Mastigocladus laminosus [TaxId:83541] [101666] (4 PDB entries)

4. ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain [50024] (3 species)

   1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [63741] (7 PDB entries)

   2. Species Chicken (Gallus gallus) [TaxId:9031] [50026] (3 PDB entries)
      Uniprot P13272 79-274 ! Uniprot P13272 # precursor of chains I,E and V,R

   3. Species Cow (Bos taurus) [TaxId:9913] [50025] (19 PDB entries)

5. Rieske protein II (SoxF) [74918] (1 species)

   • Species Sulfolobus acidocaldarius [TaxId:2285] [74919] (1 PDB entry)

6. Rieske-type ferredoxin associated with biphenyl dioxygenase [50031] (1 species)

   • Species Burkholderia cepacia [TaxId:292] [50032] (1 PDB entry)

7. Soluble Rieske protein [89291] (1 species)

   • Species Thermus thermophilus [TaxId:274] [89292] (1 PDB entry)

8. Toluene-4-monooxygenase system protein C, TmoC [110154] (1 species)

   • Species Pseudomonas mendocina [TaxId:300] [110155] (5 PDB entries)
     Uniprot Q00458

9. automated matches [190874] (7 species)
   not a true protein

   1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [257477] (1 PDB entry)

   2. Species Chicken (Gallus gallus) [TaxId:9031] [260680] (8 PDB entries)

   3. Species Cow (Bos taurus) [TaxId:9913] [254898] (1 PDB entry)

   4. Species Mastigocladus laminosus [TaxId:83541] [255132] (4 PDB entries)

   5. Species Pseudomonas sp. [TaxId:306] [188227] (3 PDB entries)

   6. Species Thermosynechococcus elongatus [TaxId:197221] [195343] (1 PDB entry)

   7. Species Thermus thermophilus HB8 [TaxId:300852] [189085] (1 PDB entry)

More info for Family b.33.1.1: Rieske iron-sulfur protein (ISP)

Timeline for Family b.33.1.1: Rieske iron-sulfur protein (ISP):

• Family b.33.1.1: Rieske iron-sulfur protein (ISP) first appeared (with stable ids) in SCOP 1.55
  
• Family b.33.1.1: Rieske iron-sulfur protein (ISP) appears in SCOPe 2.05
  
• Family b.33.1.1: Rieske iron-sulfur protein (ISP) appears in SCOPe 2.07
  
• Family b.33.1.1: Rieske iron-sulfur protein (ISP) appears in the current release, SCOPe 2.08