Lineage for Protein: Xylanase II

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1779936Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 1779937Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 1781369Family b.29.1.11: Xylanase/endoglucanase 11/12 [49978] (3 proteins)
  6. 1781414Protein Xylanase II [49979] (19 species)
    Partial overlap with common fold and the active sites of the other endoglucanases

Species:

  1. 1781415Aspergillus kawachii [TaxId:40384] [49988] (4 PDB entries)
    Uniprot P55328 29-210 # 100% sequence identity; Aspergillus awamori TaxID: 105351
    1. Domain for 1bk1:
    2. Domains for 1t6g:
      1. 1781416Domain d1t6gc_: 1t6g C: [106569]
        Other proteins in same PDB: d1t6ga_, d1t6gb_
        complexed with gol
      2. 1781417Domain d1t6gd_: 1t6g D: [106570]
        Other proteins in same PDB: d1t6ga_, d1t6gb_
        complexed with gol
    3. Domain for 3ri8:
    4. Domain for 3ri9:
  2. 1781421Aspergillus niger [TaxId:5061] [49987] (1 PDB entry)
  3. 1781426Bacillus agaradhaerens [TaxId:76935] [49982] (4 PDB entries)
    1. Domains for 1h4g:
      1. 1781427Domain d1h4ga_: 1h4g A: [70863]
        complexed with fxp, so4; mutant
      2. 1781428Domain d1h4gb_: 1h4g B: [70864]
        complexed with fxp, so4; mutant
    2. Domains for 1h4h:
      1. 1781433Domain d1h4ha_: 1h4h A: [70865]
        mutant
      2. 1781434Domain d1h4hb_: 1h4h B: [70866]
        mutant
      3. 1781435Domain d1h4hc_: 1h4h C: [70867]
        mutant
      4. 1781436Domain d1h4hd_: 1h4h D: [70868]
        mutant
    3. Domains for 1qh6:
      1. 1781431Domain d1qh6a_: 1qh6 A: [24319]
        complexed with fxp
      2. 1781432Domain d1qh6b_: 1qh6 B: [24320]
        complexed with fxp
    4. Domains for 1qh7:
      1. 1781429Domain d1qh7a_: 1qh7 A: [24317]
        complexed with xyp
      2. 1781430Domain d1qh7b_: 1qh7 B: [24318]
        complexed with xyp
  4. 1781437Bacillus circulans [TaxId:1397] [49980] (21 PDB entries)
    1. Domain for 1bcx:
    2. Domain for 1bvv:
    3. Domain for 1c5h:
    4. Domain for 1c5i:
    5. Domain for 1hv0:
    6. Domain for 1hv1:
    7. Domain for 1xnb:
    8. Domain for 1xnc:
    9. Domain for 2b42:
    10. Domain for 2b45:
    11. Domain for 2b46:
    12. Domain for 2bvv:
    13. Domains for 2dcz:
      1. 1781456Domain d2dcza_: 2dcz A: [203951]
        automated match to d2b42b_
        complexed with dio, so4
      2. 1781457Domain d2dczb_: 2dcz B: [203952]
        automated match to d2b42b_
        complexed with dio, so4
    14. Domains for 3exu:
      1. 1781450Domain d3exua_: 3exu A: [209725]
        automated match to d2b46x_
        complexed with gol, mes
      2. 1781451Domain d3exub_: 3exu B: [209726]
        automated match to d2b46x_
        complexed with gol, mes
    15. Domains for 3hd8:
      1. 1781464Domain d3hd8b_: 3hd8 B: [191737]
        Other proteins in same PDB: d3hd8a_, d3hd8c_
        automated match to d1xnba_
      2. 1781465Domain d3hd8d_: 3hd8 D: [191738]
        Other proteins in same PDB: d3hd8a_, d3hd8c_
        automated match to d1xnba_
    16. Domains for 3vzj:
      1. 1781466Domain d3vzja_: 3vzj A: [197049]
        automated match to d1xnba_
        complexed with so4; mutant
      2. 1781467Domain d3vzjb_: 3vzj B: [201259]
        automated match to d3vzja_
        complexed with so4; mutant
      3. 1781468Domain d3vzjc_: 3vzj C: [201260]
        automated match to d3vzja_
        complexed with so4; mutant
      4. 1781469Domain d3vzjd_: 3vzj D: [201261]
        automated match to d3vzja_
        complexed with so4; mutant
    17. Domains for 3vzk:
      1. 1781439Domain d3vzka_: 3vzk A: [197050]
        automated match to d1c5ha_
        complexed with so4; mutant
      2. 1781440Domain d3vzkb_: 3vzk B: [201262]
        automated match to d3vzka_
        complexed with so4; mutant
    18. Domains for 3vzl:
      1. 1781459Domain d3vzla_: 3vzl A: [201263]
        automated match to d3vzlb_
        complexed with so4; mutant
      2. 1781460Domain d3vzlb_: 3vzl B: [197051]
        automated match to d1xnba_
        complexed with so4; mutant
      3. 1781461Domain d3vzlc_: 3vzl C: [201264]
        automated match to d3vzlb_
        complexed with so4; mutant
      4. 1781462Domain d3vzld_: 3vzl D: [201265]
        automated match to d3vzlb_
        complexed with so4; mutant
    19. Domain for 3vzm:
    20. Domains for 3vzn:
      1. 1781446Domain d3vzna_: 3vzn A: [218157]
        automated match to d3vzka_
        complexed with so4; mutant
      2. 1781447Domain d3vznb_: 3vzn B: [218158]
        automated match to d3vzka_
        complexed with so4; mutant
    21. Domain for 3vzo:
  5. 1781470Bacillus subtilis [TaxId:1423] [49981] (3 PDB entries)
    1. Domains for 1axk:
      1. 1781477Domain d1axka2: 1axk A:157-341 [24315]
        Other proteins in same PDB: d1axka1, d1axkb1
        inserted into a beta-glucanase domain from Bacillus macerans
        complexed with ca
      2. 1781478Domain d1axkb2: 1axk B:157-341 [24316]
        Other proteins in same PDB: d1axka1, d1axkb1
        inserted into a beta-glucanase domain from Bacillus macerans
        complexed with ca
    2. Domain for 1xxn:
    3. Domains for 2dcy:
      1. 1781471Domain d2dcya_: 2dcy A: [131388]
        automated match to d2dcya1
        complexed with dio, tar
      2. 1781472Domain d2dcyb_: 2dcy B: [131389]
        automated match to d2dcya1
        complexed with dio, tar
      3. 1781473Domain d2dcyc_: 2dcy C: [131390]
        automated match to d2dcya1
        complexed with dio, tar
      4. 1781474Domain d2dcyd_: 2dcy D: [131391]
        automated match to d2dcya1
        complexed with dio, tar
      5. 1781475Domain d2dcye_: 2dcy E: [131392]
        automated match to d2dcya1
        complexed with dio, tar
  6. 1781479Bacillus subtilis, B230 [TaxId:1423] [74910] (1 PDB entry)
  7. 1781482Chaetomium thermophilum [TaxId:209285] [89272] (1 PDB entry)
    endoxylanase 11a
  8. 1781485Dictyoglomus thermophilum [TaxId:14] [49990] (1 PDB entry)
  9. 1781488Hypocrea jecorina [TaxId:51453] [277348] (3 PDB entries)
    1. Domain for 4xpv:
    2. Domains for 4xq4:
      1. 1781489Domain d4xq4a_: 4xq4 A: [277350]
        automated match to d2jica_
        complexed with iod
      2. 1781490Domain d4xq4b_: 4xq4 B: [277349]
        automated match to d2jica_
        complexed with iod
    3. Domains for 4xqd:
      1. 1781491Domain d4xqda_: 4xqd A: [277352]
        automated match to d2jica_
        complexed with iod, trs
      2. 1781492Domain d4xqdb_: 4xqd B: [277351]
        automated match to d2jica_
        complexed with iod, trs
  10. 1781494Nonomuraea flexuosa [TaxId:103836] [89273] (1 PDB entry)
  11. 1781496Paecilomyces variotii, Bainier 1907 [TaxId:45996] [49989] (1 PDB entry)
  12. 1781498Penicillium funiculosum [TaxId:28572] [110142] (2 PDB entries)
    Uniprot Q9HFH0
    1. Domain for 1te1:
    2. Domains for 3wp3:
      1. 1781499Domain d3wp3a_: 3wp3 A: [261311]
        automated match to d1te1b_
      2. 1781500Domain d3wp3b_: 3wp3 B: [262442]
        automated match to d3wp3a_
  13. 1781502Streptomyces sp. s38, xyl1 [TaxId:181109] [69240] (1 PDB entry)
  14. 1781505Thermomyces lanuginosus [TaxId:5541] [49986] (1 PDB entry)
  15. 1781507Trichoderma harzianum [TaxId:5544] [49983] (1 PDB entry)
  16. 1781509Trichoderma longibrachiatum [TaxId:5548] [158986] (6 PDB entries)
    1. Domain for 2jic:
    2. Domains for 3akp:
      1. 1781515Domain d3akpa_: 3akp A: [172218]
        automated match to d1enxa_
        complexed with gol
      2. 1781516Domain d3akpb_: 3akp B: [172219]
        automated match to d1enxa_
        complexed with gol
    3. Domain for 3akq:
    4. Domain for 3akr:
    5. Domain for 3aks:
    6. Domains for 3akt:
      1. 1781512Domain d3akta_: 3akt A: [172223]
        automated match to d1enxa_
        complexed with gol
      2. 1781513Domain d3aktb_: 3akt B: [172224]
        automated match to d1enxa_
        complexed with gol
  17. 1781518Trichoderma reesei [TaxId:51453] [235862] (5 PDB entries)
    1. Domain for 4hk8:
    2. Domain for 4hk9:
    3. Domain for 4hkl:
    4. Domain for 4hko:
    5. Domain for 4xqw:
  18. 1781524Trichoderma reesei, xynI [TaxId:51453] [49984] (1 PDB entry)
  19. 1781526Trichoderma reesei, xynII [TaxId:51453] [49985] (16 PDB entries)
    1. Domains for 1enx:
      1. 1781531Domain d1enxa_: 1enx A: [24325]
      2. 1781532Domain d1enxb_: 1enx B: [24326]
    2. Domains for 1red:
      1. 1781536Domain d1reda_: 1red A: [24329]
        complexed with bez, c5x
      2. 1781537Domain d1redb_: 1red B: [24330]
        complexed with bez, c5x
    3. Domains for 1ree:
      1. 1781538Domain d1reea_: 1ree A: [24331]
        complexed with bez, c4x
      2. 1781539Domain d1reeb_: 1ree B: [24332]
        complexed with bez, c4x
    4. Domains for 1ref:
      1. 1781540Domain d1refa_: 1ref A: [24333]
        complexed with bez, c3x
      2. 1781541Domain d1refb_: 1ref B: [24334]
        complexed with bez, c3x
    5. Domains for 1xyo:
      1. 1781529Domain d1xyoa_: 1xyo A: [24323]
      2. 1781530Domain d1xyob_: 1xyo B: [24324]
    6. Domains for 1xyp:
      1. 1781534Domain d1xypa_: 1xyp A: [24327]
      2. 1781535Domain d1xypb_: 1xyp B: [24328]
    7. Domain for 2d97:
    8. Domain for 2d98:
    9. Domain for 2dfb:
    10. Domain for 2dfc:
    11. Domain for 3lgr:
    12. Domain for 4hkw:
    13. Domain for 4s2d:
    14. Domain for 4s2f:
    15. Domain for 4s2g:
    16. Domain for 4s2h:

More info for Protein Xylanase II from b.29.1.11: Xylanase/endoglucanase 11/12

Timeline for Protein Xylanase II from b.29.1.11: Xylanase/endoglucanase 11/12: